RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA380129" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380129 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4902050 4902050 PRJNA380129_P_NODE_1664_length_435_cov_1.330049_g1341_i0 PRJNA380129 1664 435 1.330049 5.78571315 Anostraca 6659 Arthropoda Arthropoda 259 2.31e-64   NTclustered gi|2743022712|ref|XM_065726723.1| 6661 g1341 i0 99.301 44.0183908045977 143 1 45 0 293 435 210 68 PREDICTED: Artemia franciscana uncharacterized LOC136041929 (LOC136041929), mRNA blastn 19148 259 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
7452043 7452043 PRJNA380129_P_NODE_2406_length_378_cov_0.719198_g2082_i0 PRJNA380129 2406 378 0.719198 2.71856844 Artemia 6660 Arthropoda Arthropoda 167 1.23e-36   NTclustered gi|5835051|ref|NC_001620.1| 6661 g2082 i0 100 4.92857142857143 90 0 41 0 1 90 13817 13906 Artemia franciscana clone pMA-1 & pMA-3 mitochondrion, complete genome blastn 1863 167 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;