contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 401199 | 401199 | PRJNA379145_P_NODE_68441_length_163_cov_1.938462_g66287_i0 | PRJNA379145 | 68441 | 163 | 1.938462 | 3.15969306 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 267 | 4.459999999999999e-67 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g66287 | i0 | 96.855 | 334.779141104294 | 159 | 5 | 98 | 0 | 1 | 159 | 1008969 | 1008811 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 54569 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 4227986 | 4227986 | PRJNA379145_P_NODE_32224_length_385_cov_3.633523_g30089_i0 | PRJNA379145 | 32224 | 385 | 3.633523 | 13.98906355 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 407 | 6.809999999999999e-109 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g30089 | i0 | 85.751 | 195.236363636364 | 386 | 53 | 100 | 2 | 1 | 385 | 455029 | 455413 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 75166 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 4902017 | 4902017 | PRJNA379145_P_NODE_71824_length_155_cov_1.688525_g69669_i0 | PRJNA379145 | 71824 | 155 | 1.688525 | 2.61721375 | Akkermansia | 239934 | Bacteria | Bacteria | 104 | 3.47e-18 | NTclustered | gi|2289586829|dbj|AP025943.1| | 2946555 | g69669 | i0 | 91.892 | 8.54838709677419 | 74 | 6 | 48 | 0 | 74 | 147 | 1765855 | 1765782 | Akkermansia biwaensis WON2089 DNA, complete genome | blastn | 1325 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia biwaensis | |
| 5504517 | 5504517 | PRJNA379145_P_NODE_43665_length_273_cov_3.695833_g41513_i0 | PRJNA379145 | 43665 | 273 | 3.695833 | 10.08962409 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 436 | 5.9199999999999985e-118 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g41513 | i0 | 95.588 | 289.714285714286 | 272 | 12 | 99 | 0 | 2 | 273 | 3411545 | 3411816 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 79092 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 9329094 | 9329094 | PRJNA379145_P_NODE_55308_length_207_cov_2.356322_g53154_i0 | PRJNA379145 | 55308 | 207 | 2.356322 | 4.87758654 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 359 | 9.53e-95 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g53154 | i0 | 99 | 304.463768115942 | 200 | 2 | 97 | 0 | 1 | 200 | 1321652 | 1321453 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 63024 | 359 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 13154669 | 13154669 | PRJNA379145_P_NODE_44951_length_264_cov_2.333333_g42799_i0 | PRJNA379145 | 44951 | 264 | 2.333333 | 6.15999912 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 414 | 2.6699999999999998e-111 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g42799 | i0 | 95.057 | 119.799242424242 | 263 | 13 | 99 | 0 | 2 | 264 | 3803528 | 3803790 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 31627 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 15703542 | 15703542 | PRJNA379145_P_NODE_35793_length_343_cov_4.600000_g33646_i0 | PRJNA379145 | 35793 | 343 | 4.6 | 15.778 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 562 | 1.21e-155 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g33646 | i0 | 96.221 | 287.833819241982 | 344 | 11 | 100 | 2 | 1 | 343 | 1035 | 693 | Luteolibacter sp. SL250 chromosome | blastn | 98727 | 562 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 15703875 | 15703875 | PRJNA379145_P_NODE_71053_length_157_cov_1.500000_g68898_i0 | PRJNA379145 | 71053 | 157 | 1.5 | 2.355 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 233 | 4.31e-57 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g68898 | i0 | 93.711 | 164.898089171975 | 159 | 4 | 100 | 5 | 1 | 157 | 3048334 | 3048488 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 25889 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 18252723 | 18252723 | PRJNA379145_P_NODE_61815_length_182_cov_2.369128_g59661_i0 | PRJNA379145 | 61815 | 182 | 2.369128 | 4.31181296 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 124 | 3.2299999999999997e-24 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g59661 | i0 | 93.976 | 1.78021978021978 | 83 | 4 | 46 | 1 | 1 | 83 | 2749968 | 2749887 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 324 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19526681 | 19526681 | PRJNA379145_P_NODE_35776_length_344_cov_1.234727_g33629_i0 | PRJNA379145 | 35776 | 344 | 1.234727 | 4.24746088 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 542 | 1.58e-149 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g33629 | i0 | 95.058 | 127.988372093023 | 344 | 17 | 100 | 0 | 1 | 344 | 5152926 | 5153269 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 44028 | 542 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20802020 | 20802020 | PRJNA379145_P_NODE_14197_length_764_cov_4.181943_g12657_i0 | PRJNA379145 | 14197 | 764 | 4.181943 | 31.95004452 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 1072 | 0 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g12657 | i0 | 94.294 | 290.611256544503 | 701 | 39 | 92 | 1 | 64 | 764 | 1343 | 2042 | Luteolibacter sp. SL250 chromosome | blastn | 222027 | 1072 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 20802052 | 20802052 | PRJNA379145_P_NODE_16777_length_678_cov_7.896124_g15060_i0 | PRJNA379145 | 16777 | 678 | 7.896124 | 53.53572072 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 520 | 1.54e-142 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g15060 | i0 | 92.391 | 147.622418879056 | 368 | 23 | 54 | 5 | 1 | 366 | 455381 | 455745 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 100088 | 520 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 22077273 | 22077273 | PRJNA379145_P_NODE_28258_length_442_cov_2.264059_g26166_i0 | PRJNA379145 | 28258 | 442 | 2.264059 | 10.00714078 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 616 | 1.2099999999999996e-171 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g26166 | i0 | 92.027 | 170.984162895928 | 439 | 33 | 99 | 1 | 4 | 442 | 27979 | 28415 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 75575 | 616 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 22077440 | 22077440 | PRJNA379145_P_NODE_43678_length_273_cov_2.620833_g41526_i0 | PRJNA379145 | 43678 | 273 | 2.620833 | 7.15487409 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 361 | 3.67e-95 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g41526 | i0 | 90.545 | 122.223443223443 | 275 | 22 | 100 | 4 | 1 | 273 | 454490 | 454762 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 33367 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 24627364 | 24627364 | PRJNA379145_P_NODE_62120_length_181_cov_2.966216_g59966_i0 | PRJNA379145 | 62120 | 181 | 2.966216 | 5.36885096 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 126 | 8.93e-25 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g59966 | i0 | 79.474 | 5.24861878453039 | 190 | 30 | 100 | 7 | 1 | 181 | 633335 | 633146 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 950 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;