RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8054011 8054011 PRJNA379145_P_NODE_28707_length_435_cov_3.868159_g26611_i0 PRJNA379145 28707 435 3.868159 16.82649165 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.003   NTclustered gi|2794963637|ref|XM_067873393.1| 2049356 g26611 i0 97.059 0.416091954022988 34 0 8 1 153 185 2160 2193 Monocercomonoides exilis putative protein phosphatase (MONOS_3394), partial mRNA blastn 181 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16978207 16978207 PRJNA379145_P_NODE_36694_length_334_cov_1.571429_g34546_i0 PRJNA379145 36694 334 1.571429 5.24857286 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.009   NTclustered gi|2794976015|ref|XM_067880320.1| 2049356 g34546 i0 100 0.0868263473053892 29 0 9 0 43 71 664 636 Monocercomonoides exilis uncharacterized protein (MONOS_9789), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;