RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Nucleocytoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA379145 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2951830 2951830 PRJNA379145_P_NODE_9223_length_996_cov_3.191070_g848_i1 PRJNA379145 9223 996 3.19107 31.7830572 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 65.8 1.3e-5   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g848 i1 90 9.25502008032129 50 5 5 0 946 995 655182 655231 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 9218 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
10604811 10604811 PRJNA379145_P_NODE_57769_length_197_cov_2.396341_g55615_i0 PRJNA379145 57769 197 2.396341 4.72079177 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 134 5.92e-27   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g55615 i0 80 0.913705583756345 180 36 91 0 13 192 900337 900516 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 180 134 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
14429945 14429945 PRJNA379145_P_NODE_8152_length_1065_cov_3.426357_g7180_i0 PRJNA379145 8152 1065 3.426357 36.49070205 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 616 3.059999999999999e-171   NTclustered gi|2661003910|emb|OZ003748.1| 3072188 g7180 i0 78.02 1.20657276995305 1010 201 93 13 62 1054 727159 728164 Catovirus sp. 'naegleriensis' strain 1 genome assembly, chromosome: 1 blastn 1285 616 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
16977884 16977884 PRJNA379145_P_NODE_11734_length_866_cov_3.178872_g10406_i0 PRJNA379145 11734 866 3.178872 27.52903152 Orthopoxvirus cowpox 3431481 Viruses Viruses 56.5 0.007   NTclustered gi|1243284674|gb|KY569022.1| 10243 g10406 i0 100 0.207852193995381 30 0 3 0 444 473 154342 154313 Cowpox virus strain CPXV CheTopCut_DK_2011 blastn 180 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus cowpox
20802198 20802198 PRJNA379145_P_NODE_28377_length_440_cov_2.808354_g26284_i0 PRJNA379145 28377 440 2.808354 12.3567576 Terrestrivirus sp. 2487775 Viruses Viruses 58.4 0.001   NTclustered gi|1512470699|gb|MK071980.1| 2487775 g26284 i0 97.059 0.0772727272727273 34 1 8 0 207 240 106899 106866 MAG: Terrestrivirus sp. clone Terrestrivirus_2 genomic sequence blastn 34 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;