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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
400924 400924 PRJNA379145_P_NODE_38201_length_319_cov_2.622378_g36050_i0 PRJNA379145 38201 319 2.622378 8.36538582 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 239 2.14e-58   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g36050 i0 81.169 36.0783699059561 308 48 95 8 17 319 1 303 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 11509 239 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
401228 401228 PRJNA379145_P_NODE_72501_length_154_cov_1.066116_g70346_i0 PRJNA379145 72501 154 1.066116 1.64181864 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 252 1.16e-62   NTclustered gi|470426870|ref|XM_004337894.1| 1257118 g70346 i0 96.104 1 154 6 100 0 1 154 276 429 Acanthamoeba castellanii str. Neff eukaryotic initiation factor 5a, putative (ACA1_023810), partial mRNA blastn 154 252 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2349388 2349388 PRJNA379145_P_NODE_68762_length_162_cov_3.782946_g66608_i0 PRJNA379145 68762 162 3.782946 6.12837252 Ripella 1217112 Discosea other_Eukaryota 268 1.23e-67   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g66608 i0 96.914 100.506172839506 162 2 99 3 1 161 833 992 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 16282 270 0.992592592592593 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
2951555 2951555 PRJNA379145_P_NODE_4443_length_1406_cov_40.144210_g3887_i0 PRJNA379145 4443 1406 40.14421 564.4275926 Paramoeba branchiphila 308475 Discosea other_Eukaryota 815 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g3887 i0 78.969 89.4857752489331 1203 245 85 7 54 1252 2 1200 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 125817 815 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
2951619 2951619 PRJNA379145_P_NODE_51443_length_225_cov_8.635417_g49289_i0 PRJNA379145 51443 225 8.635417 19.42968825 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 95.3 3.28e-15   NTclustered gi|470519749|ref|XM_004353447.1| 1257118 g49289 i0 91.304 0.982222222222222 69 6 31 0 63 131 156 88 Acanthamoeba castellanii str. Neff ribosomal L29e protein family (ACA1_143310), partial mRNA blastn 221 95.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5504657 5504657 PRJNA379145_P_NODE_58045_length_196_cov_2.073620_g55891_i0 PRJNA379145 58045 196 2.07362 4.0642952 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 2.04e-51   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g55891 i0 88.636 88.5102040816327 176 20 90 0 21 196 58 233 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 17348 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6778809 6778809 PRJNA379145_P_NODE_60726_length_186_cov_1.830065_g58572_i0 PRJNA379145 60726 186 1.830065 3.4039209 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 333 5.069999999999999e-87   NTclustered gi|470450828|ref|XM_004340382.1| 1257118 g58572 i0 98.925 98.3010752688172 186 2 100 0 1 186 867 682 Acanthamoeba castellanii str. Neff elongation factor 1alpha, somatic form, putative (ACA1_138040), partial mRNA blastn 18284 333 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11879773 11879773 PRJNA379145_P_NODE_56630_length_202_cov_1.532544_g54476_i0 PRJNA379145 56630 202 1.532544 3.09573888 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 1.71e-22   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g54476 i0 78 1.58415841584158 200 36 97 5 1 196 934 739 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 320 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11879848 11879848 PRJNA379145_P_NODE_64190_length_175_cov_1.521127_g62036_i0 PRJNA379145 64190 175 1.521127 2.66197225 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 324 2.83e-84   NTclustered gi|470515092|ref|XM_004352825.1| 1257118 g62036 i0 100 63.32 175 0 100 0 1 175 179 353 Acanthamoeba castellanii str. Neff ribosomal protein s24e, putative (ACA1_069330), partial mRNA blastn 11081 324 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13827418 13827418 PRJNA379145_P_NODE_12471_length_833_cov_8.960000_g8114_i4 PRJNA379145 12471 833 8.96 74.6368 Vannellidae 95227 Discosea other_Eukaryota 673 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g8114 i4 90.98 100.795918367347 510 30 99 11 334 831 518 13 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 83963 675 0.997037037037037 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
14429254 14429254 PRJNA379145_P_NODE_11352_length_883_cov_8.254118_g8114_i2 PRJNA379145 11352 883 8.254118 72.88386194 Ripella sp. 805 1217113 Discosea other_Eukaryota 1282 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g8114 i2 93.439 99.9229898074745 884 26 99 21 2 875 862 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 88232 1282 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
14429481 14429481 PRJNA379145_P_NODE_26712_length_466_cov_2.099307_g24648_i0 PRJNA379145 26712 466 2.099307 9.78277062 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 5.419999999999999e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g24648 i0 80.464 64.568669527897 302 59 65 0 99 400 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30089 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15101786 15101786 PRJNA379145_P_NODE_11612_length_871_cov_8.446301_g8114_i3 PRJNA379145 11612 871 8.446301 73.56728171 Vannellidae 95227 Discosea other_Eukaryota 1179 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g8114 i3 91.29 100.543053960964 884 48 99 19 3 870 13 883 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 87573 1184 0.995777027027027 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
15703432 15703432 PRJNA379145_P_NODE_25653_length_484_cov_8.616408_g8114_i5 PRJNA379145 25653 484 8.616408 41.70341472 Ripella sp. 805 1217113 Discosea other_Eukaryota 752 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g8114 i5 94.715 101.719008264463 492 12 100 12 1 484 506 21 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 49232 752 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18252530 18252530 PRJNA379145_P_NODE_40855_length_296_cov_1.547529_g38704_i0 PRJNA379145 40855 296 1.547529 4.58068584 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 542 1.34e-149   NTclustered gi|470406900|ref|XM_004335952.1| 1257118 g38704 i0 99.662 7.47635135135135 296 1 100 0 1 296 323 28 Acanthamoeba castellanii str. Neff ribosomal protein S4, putative (ACA1_365780), partial mRNA blastn 2213 542 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18252733 18252733 PRJNA379145_P_NODE_63395_length_177_cov_1.909722_g61241_i0 PRJNA379145 63395 177 1.909722 3.38020794 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 327 2.2199999999999996e-85   NTclustered gi|470467737|ref|XM_004341780.1| 1257118 g61241 i0 100 96.0960451977401 177 0 100 0 1 177 611 435 Acanthamoeba castellanii str. Neff elongation factor 1-alpha, putative (ACA1_200430), partial mRNA blastn 17009 327 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19526476 19526476 PRJNA379145_P_NODE_19456_length_609_cov_2.932292_g17607_i0 PRJNA379145 19456 609 2.932292 17.85765828 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.017   NTclustered gi|470392879|ref|XM_004334764.1| 1257118 g17607 i0 100 0.0476190476190476 29 0 5 0 517 545 1632 1604 Acanthamoeba castellanii str. Neff Tubulin/FtsZ family, GTPase domain containing protein (ACA1_093450), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19526915 19526915 PRJNA379145_P_NODE_59236_length_192_cov_1.006289_g57082_i0 PRJNA379145 59236 192 1.006289 1.93207488 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 355 1.13e-93   NTclustered gi|470420301|ref|XM_004337232.1| 1257118 g57082 i0 100 1 192 0 100 0 1 192 128 319 Acanthamoeba castellanii str. Neff 40S ribosomal protein S3a, putative (ACA1_220040), partial mRNA blastn 192 355 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20802548 20802548 PRJNA379145_P_NODE_65357_length_171_cov_3.427536_g63203_i0 PRJNA379145 65357 171 3.427536 5.86108656 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 261 2.19e-65   NTclustered gi|5565|emb|V00002.1| 5755 g63203 i0 94.152 99.7953216374269 171 10 100 0 1 171 205 375 Acanthamoeba castelani gene encoding actin I blastn 17065 261 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22077435 22077435 PRJNA379145_P_NODE_43358_length_276_cov_1.547325_g41206_i0 PRJNA379145 43358 276 1.547325 4.270617 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 6.53e-58   NTclustered gi|470504026|ref|XM_004348289.1| 1257118 g41206 i0 82.847 88.4275362318841 274 38 97 6 10 276 1199 928 Acanthamoeba castellanii str. Neff H(+)-transporting atpase family protein (ACA1_022710), partial mRNA blastn 24406 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22077580 22077580 PRJNA379145_P_NODE_60938_length_185_cov_2.664474_g58784_i0 PRJNA379145 60938 185 2.664474 4.9292769 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 285 1.43e-72   NTclustered gi|470515092|ref|XM_004352825.1| 1257118 g58784 i0 99.363 0.848648648648649 157 1 85 0 29 185 1 157 Acanthamoeba castellanii str. Neff ribosomal protein s24e, putative (ACA1_069330), partial mRNA blastn 157 285 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22077693 22077693 PRJNA379145_P_NODE_74338_length_150_cov_1.162393_g72183_i0 PRJNA379145 74338 150 1.162393 1.7435895 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 71.3 3.37e-8   NTclustered gi|470483660|ref|XM_004343944.1| 1257118 g72183 i0 97.561 0.273333333333333 41 1 27 0 87 127 3254 3214 Acanthamoeba castellanii str. Neff aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain containing protein (ACA1_052830), partial mRNA blastn 41 71.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24025840 24025840 PRJNA379145_P_NODE_71759_length_155_cov_1.950820_g69604_i0 PRJNA379145 71759 155 1.95082 3.023771 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 7.46e-20   NTclustered gi|62865955|gb|AY929930.1| 325074 g69604 i0 91.358 53.0129032258065 81 6 52 1 61 140 305 225 Vannella sp. strain 4354/I internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 8217 110 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4354/I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;