contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Chloroflexota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8054358 | 8054358 | PRJNA379145_P_NODE_65687_length_170_cov_3.284672_g63533_i0 | PRJNA379145 | 65687 | 170 | 3.284672 | 5.5839424 | Thermosporothrix sp. COM3 | 2490863 | Bacteria | Bacteria | 67.6 | 5.08e-7 | NTclustered | gi|1606557374|dbj|AP019376.1| | 2490863 | g63533 | i0 | 90.566 | 0.311764705882353 | 53 | 2 | 31 | 3 | 6 | 58 | 4867043 | 4866994 | Thermosporothrix sp. COM3 DNA, nearly complete genome | blastn | 53 | 67.6 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Thermosporotrichaceae | Thermosporothrix | Thermosporothrix sp. COM3 | ||
| 8054413 | 8054413 | PRJNA379145_P_NODE_72467_length_154_cov_1.198347_g70312_i0 | PRJNA379145 | 72467 | 154 | 1.198347 | 1.84545438 | Thermosporothrix sp. COM3 | 2490863 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|1606557374|dbj|AP019376.1| | 2490863 | g70312 | i0 | 100 | 0.181818181818182 | 28 | 0 | 18 | 0 | 106 | 133 | 1035009 | 1034982 | Thermosporothrix sp. COM3 DNA, nearly complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Thermosporotrichaceae | Thermosporothrix | Thermosporothrix sp. COM3 | ||
| 9329112 | 9329112 | PRJNA379145_P_NODE_57688_length_198_cov_1.321212_g55534_i0 | PRJNA379145 | 57688 | 198 | 1.321212 | 2.61599976 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 145 | 2.75e-30 | NTclustered | gi|2874253766|emb|OY969711.1| | 1672391 | g55534 | i0 | 80.296 | 7.57070707070707 | 203 | 30 | 100 | 10 | 1 | 198 | 240389 | 240192 | MAG: uncultured Chloroflexia bacterium isolate MFD09730.bin.c.1 genome assembly, chromosome: 1 | blastn | 1499 | 145 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 11879907 | 11879907 | PRJNA379145_P_NODE_70430_length_158_cov_2.576000_g68275_i0 | PRJNA379145 | 70430 | 158 | 2.576 | 4.07008 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 115 | 1.6400000000000002e-21 | NTclustered | gi|2893356069|emb|OZ220492.1| | 2614250 | g68275 | i0 | 95.775 | 81.9556962025316 | 71 | 3 | 45 | 0 | 88 | 158 | 2777223 | 2777153 | MAG: Caldilineaceae bacterium isolate e886e3b1-96bd-41d4-96ed-8e2f365de7fb genome assembly, chromosome: 1 | blastn | 12949 | 115 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 13154809 | 13154809 | PRJNA379145_P_NODE_59811_length_189_cov_3.301282_g57657_i0 | PRJNA379145 | 59811 | 189 | 3.301282 | 6.23942298 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 250 | 5.36e-62 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g57657 | i0 | 90.526 | 139.396825396825 | 190 | 16 | 100 | 2 | 1 | 189 | 274001 | 274189 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 26346 | 250 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 15703698 | 15703698 | PRJNA379145_P_NODE_50673_length_230_cov_1.370558_g48519_i0 | PRJNA379145 | 50673 | 230 | 1.370558 | 3.1522834 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 224 | 4.11e-54 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g48519 | i0 | 84.783 | 8.10434782608696 | 230 | 28 | 100 | 3 | 1 | 230 | 1400 | 1178 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 1864 | 224 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 | ||
| 20802549 | 20802549 | PRJNA379145_P_NODE_65637_length_171_cov_1.072464_g63483_i0 | PRJNA379145 | 65637 | 171 | 1.072464 | 1.83391344 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 158 | 2.9499999999999992e-34 | NTclustered | gi|2621706198|emb|OY764542.1| | 2026734 | g63483 | i0 | 83.425 | 43.9356725146199 | 181 | 18 | 99 | 10 | 2 | 171 | 2051852 | 2052031 | MAG: Dehalococcoidia bacterium isolate 6a5b5718-e0ca-4583-9154-875545b380e3 genome assembly, chromosome: 1 | blastn | 7513 | 158 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 22077234 | 22077234 | PRJNA379145_P_NODE_25138_length_493_cov_2.378261_g23108_i0 | PRJNA379145 | 25138 | 493 | 2.378261 | 11.72482673 | uncultured Dehalococcoidia bacterium | 498747 | Bacteria | Bacteria | 122 | 3.62e-23 | NTclustered | gi|2531976022|emb|OY282355.1| | 498747 | g23108 | i0 | 82.734 | 11.7342799188641 | 139 | 22 | 28 | 2 | 310 | 447 | 2403026 | 2402889 | MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 | blastn | 5785 | 122 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | uncultured Dehalococcoidia bacterium | |||||
| 22077339 | 22077339 | PRJNA379145_P_NODE_33718_length_367_cov_2.071856_g31574_i0 | PRJNA379145 | 33718 | 367 | 2.071856 | 7.60371152 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2891482216|emb|OZ219949.1| | 2026734 | g31574 | i0 | 100 | 0.152588555858311 | 28 | 0 | 8 | 0 | 31 | 58 | 1658994 | 1659021 | MAG: Dehalococcoidia bacterium isolate 99137651-b1e7-4859-9a90-ab3a7f48d20f genome assembly, chromosome: 5 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 23352653 | 23352653 | PRJNA379145_P_NODE_21679_length_558_cov_3.099048_g19749_i0 | PRJNA379145 | 21679 | 558 | 3.099048 | 17.29268784 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g19749 | i0 | 88.406 | 161.34229390681 | 552 | 52 | 97 | 9 | 17 | 558 | 273452 | 274001 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 90029 | 654 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;