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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA379145" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
401103 401103 PRJNA379145_P_NODE_57741_length_197_cov_3.371951_g55587_i0 PRJNA379145 57741 197 3.371951 6.64274347 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 163 7.55e-36   NTclustered gi|302563026|dbj|AB546336.1| 39717 g55587 i0 83.616 83.258883248731 177 25 89 4 3 177 528 354 Paulinella chromatophora EF-1a mRNA for elongation factor 1alpha, partial cds blastn 16402 163 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
1074072 1074072 PRJNA379145_P_NODE_48441_length_242_cov_2.081340_g46287_i0 PRJNA379145 48441 242 2.08134 5.0368428 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 121 5.889999999999999e-23   NTclustered gi|224549835|gb|FJ456916.1| 39717 g46287 i0 87.5 21.1652892561983 104 13 43 0 139 242 771 668 Paulinella chromatophora strain M0880/a actin gene, partial cds blastn 5122 122 0.991803278688525 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
1074113 1074113 PRJNA379145_P_NODE_72081_length_154_cov_3.669421_g69926_i0 PRJNA379145 72081 154 3.669421 5.65090834 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 285 1.14e-72   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g69926 i0 100 25.3636363636364 154 0 100 0 1 154 1355 1202 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 3906 285 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
1675306 1675306 PRJNA379145_P_NODE_18742_length_626_cov_6.347386_g16925_i0 PRJNA379145 18742 626 6.347386 39.73463636 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 1120 0   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g16925 i0 99.042 18.3929712460064 626 3 100 2 1 626 643 21 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 11514 1120 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
1675709 1675709 PRJNA379145_P_NODE_53942_length_213_cov_2.027778_g51788_i0 PRJNA379145 53942 213 2.027778 4.31916714 Cercomonas sp. HFCC549 458874 SAR_Eukaryotes SAR_Eukaryotes 372 1.27e-98   NTclustered gi|161015714|gb|EF681948.1| 458874 g51788 i0 98.122 13.4084507042254 213 4 100 0 1 213 333 545 Cercomonas sp. HFCC549 28S ribosomal RNA gene, partial sequence blastn 2856 372 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC549
2951703 2951703 PRJNA379145_P_NODE_6103_length_1229_cov_2.887124_g5359_i0 PRJNA379145 6103 1229 2.887124 35.48275396 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 527 1.7099999999999993e-144   NTclustered gi|116222176|gb|DQ980464.1| 407209 g5359 i0 83.247 40.4849471114727 579 91 47 6 654 1229 1051 476 Thaumatomonas sp. TMT002 Hsp90 mRNA, partial cds blastn 49756 527 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
7451973 7451973 PRJNA379145_P_NODE_48066_length_244_cov_27.890995_g45913_i0 PRJNA379145 48066 244 27.890995 68.0540278 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 398 2.4499999999999996e-106   NTclustered gi|512134091|gb|KC575315.1| 175275 g45913 i0 95.935 101.368852459016 246 8 100 2 1 244 141 386 Uncultured cercozoan clone A.3.2 18S ribosomal RNA gene, partial sequence blastn 24734 398 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
8053935 8053935 PRJNA379145_P_NODE_23367_length_525_cov_4.772358_g21384_i0 PRJNA379145 23367 525 4.772358 25.0548795 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 811 0   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g21384 i0 94.857 36.8361904761905 525 17 100 5 1 525 1500 2014 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 19339 811 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
9328697 9328697 PRJNA379145_P_NODE_16628_length_683_cov_3.635385_g14920_i0 PRJNA379145 16628 683 3.635385 24.82967955 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.005   NTclustered gi|116222178|gb|DQ980465.1| 407209 g14920 i0 100 0.133235724743777 30 0 4 0 303 332 681 652 Thaumatomonas sp. TMT002 Hsp90 mRNA, partial cds blastn 91 56.5 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
15703471 15703471 PRJNA379145_P_NODE_29253_length_427_cov_2.979695_g27148_i0 PRJNA379145 29253 427 2.979695 12.72329765 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 424 7.57e-114   NTclustered gi|145558660|gb|EF517356.1| 39714 g27148 i0 84.579 98.7236533957845 428 64 100 2 1 427 668 242 Euglypha rotunda strain CCAP 1520/1 actin gene, partial cds blastn 42155 424 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
18252776 18252776 PRJNA379145_P_NODE_68355_length_163_cov_3.546154_g66201_i0 PRJNA379145 68355 163 3.546154 5.78023102 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 239 9.72e-59   NTclustered gi|238617605|gb|FJ973380.1| 45107 g66201 i0 93.21 100.288343558282 162 11 99 0 1 162 1025 1186 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 16347 239 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23352654 23352654 PRJNA379145_P_NODE_21719_length_557_cov_4.637405_g19787_i0 PRJNA379145 21719 557 4.637405 25.83034585 Guttulinopsis sp. 2231167 SAR_Eukaryotes SAR_Eukaryotes 832 0   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g19787 i0 94.118 22.0071813285458 561 10 99 14 1 556 1190 648 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 12258 832 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
25300181 25300181 PRJNA379145_P_NODE_18820_length_624_cov_7.725888_g16999_i0 PRJNA379145 18820 624 7.725888 48.20954112 Colponemidia 1492816 SAR_Eukaryotes SAR_Eukaryotes 754 0   NTclustered gi|238617670|gb|FJ973414.1| 646463 g16999 i0 88.462 99.5272435897436 624 72 100 0 1 624 842 219 Gymnophrys sp. ATCC 50923 alpha-tubulin (atub) gene, partial cds blastn 62105 754 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;