RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13153729 13153729 PRJNA376117_P_NODE_34851_length_250_cov_0.870056_g34549_i0 PRJNA376117 34851 250 0.870056 2.17514 Natronomonas halophila 2747817 Archaea Archaea 449 6.87e-122   NTclustered gi|1865516082|gb|CP058334.1| 2747817 g34549 i0 99.197 2.284 249 2 99 0 2 250 978647 978399 Natronomonas halophila strain C90 chromosome, complete genome blastn 571 449 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas halophila
18925292 18925292 PRJNA376117_P_NODE_5255_length_593_cov_2.019231_g4960_i0 PRJNA376117 5255 593 2.019231 11.97403983 Thermococcus 2263 Archaea Archaea 1020 0   NTclustered gi|189908859|gb|EU571472.1| 342948 g4960 i0 100 14.2428330522766 552 0 93 0 33 584 555 4 Thermococcus onnurineus dITPase gene, complete cds blastn 8446 1020 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus onnurineus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;