RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1674360 1674360 PRJNA376117_P_NODE_13322_length_373_cov_2.963333_g13020_i0 PRJNA376117 13322 373 2.963333 11.05323209 Umbelopsis ramanniana 41833 Fungi Fungi 244 5.449999999999999e-60   NTclustered gi|2323693952|ref|XM_051591015.1| 1314678 g13020 i0 80.368 14.0938337801609 326 61 87 3 20 344 370 47 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_253289), mRNA blastn 5257 244 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
4226965 4226965 PRJNA376117_P_NODE_23484_length_288_cov_1.074419_g23182_i0 PRJNA376117 23484 288 1.074419 3.09432672 Gamsiella multidivaricata 101098 Fungi Fungi 243 1.47e-59   NTclustered gi|2323790933|ref|XM_051559605.1| 101098 g23182 i0 82.963 12.6493055555556 270 44 93 2 10 278 1370 1102 Gamsiella multidivaricata pseudouridine synthase (BC939DRAFT_494473), partial mRNA blastn 3643 243 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
4227128 4227128 PRJNA376117_P_NODE_34544_length_250_cov_1.858757_g34242_i0 PRJNA376117 34544 250 1.858757 4.6468925 Mucor indicus 64623 Fungi Fungi 440 4.1399999999999976e-119   NTclustered gi|2627921281|ref|NC_084441.1| 64623 g34242 i0 98.406 49.56 251 3 100 1 1 250 41677 41427 Mucor indicus mitochondrion, complete genome blastn 12390 440 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor indicus
6777584 6777584 PRJNA376117_P_NODE_31306_length_260_cov_1.401070_g31004_i0 PRJNA376117 31306 260 1.40107 3.642782 Rhizopus stolonifer 4846 Fungi Fungi 475 1.1899999999999999e-129   NTclustered gi|30142150|gb|AY257252.1| 4846 g31004 i0 99.615 67.7615384615385 260 1 100 0 1 260 3177 2918 Rhizopus stolonifer heat shock cognate protein 70 (ssb1) gene, partial cds blastn 17618 475 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
9327813 9327813 PRJNA376117_P_NODE_16748_length_336_cov_3.281369_g16446_i0 PRJNA376117 16748 336 3.281369 11.02539984 Rhizopus stolonifer 4846 Fungi Fungi 621 1.9299999999999997e-173   NTclustered gi|82398553|gb|DQ273817.1| 4846 g16446 i0 100 100.571428571429 336 0 100 0 1 336 2527 2862 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 33792 621 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
10001743 10001743 PRJNA376117_P_NODE_17108_length_333_cov_1.923077_g16806_i0 PRJNA376117 17108 333 1.923077 6.40384641 Eukaryota 2759 Fungi Fungi 261 4.790000000000001e-65   NTclustered gi|1069961781|ref|XM_018429763.1| 763407 g16806 i0 80.952 99.9189189189189 336 58 100 6 1 333 531 863 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 33273 261 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
10603817 10603817 PRJNA376117_P_NODE_40709_length_244_cov_2.690058_g40407_i0 PRJNA376117 40709 244 2.690058 6.56374152 Rhizomucor pusillus 4840 Fungi Fungi 198 2.67e-46   NTclustered gi|2837739395|ref|XM_069378928.1| 4840 g40407 i0 81.78 27.5532786885246 236 43 97 0 4 239 320 85 Rhizomucor pusillus 60S ribosomal protein uL3 (VTP01DRAFT_10553), partial mRNA blastn 6723 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
11878400 11878400 PRJNA376117_P_NODE_15150_length_352_cov_1.422939_g14848_i0 PRJNA376117 15150 352 1.422939 5.00874528 Phycomyces blakesleeanus 4837 Fungi Fungi 276 1.81e-69   NTclustered gi|1069937271|ref|XM_018429265.1| 763407 g14848 i0 82.692 60.9232954545455 312 52 88 2 2 312 360 50 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 21445 276 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
15702489 15702489 PRJNA376117_P_NODE_20393_length_306_cov_1.321888_g20091_i0 PRJNA376117 20393 306 1.321888 4.04497728 Gamsiella multidivaricata 101098 Fungi Fungi 342 1.5099999999999997e-89   NTclustered gi|2323771601|ref|XM_051554141.1| 101098 g20091 i0 86.928 72.0555555555556 306 38 99 2 1 305 683 379 Gamsiella multidivaricata WD40 repeat-like protein (BC939DRAFT_440867), mRNA blastn 22049 342 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
15702556 15702556 PRJNA376117_P_NODE_25113_length_282_cov_1.468900_g24811_i0 PRJNA376117 25113 282 1.4689 4.142298 Rhizopus delemar 936053 Fungi Fungi 405 1.73e-108   NTclustered gi|2797409895|ref|XM_067655946.1| 246409 g24811 i0 92.857 26.3581560283688 280 18 99 2 4 282 851 573 Rhizopus delemar RA 99-880 guanine nucleotide-binding protein subunit beta-2-like 1 (RO3G_01355), partial mRNA blastn 7433 405 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
15702607 15702607 PRJNA376117_P_NODE_2893_length_843_cov_2.719481_g2627_i0 PRJNA376117 2893 843 2.719481 22.92522483 Gamsiella multidivaricata 101098 Fungi Fungi 610 1.1199999999999995e-169   NTclustered gi|2323787328|ref|XM_051556087.1| 101098 g2627 i0 81.417 90.1601423487544 748 137 89 2 88 834 102 848 Gamsiella multidivaricata 60S ribosomal protein L3 (BC939DRAFT_454620), mRNA blastn 76005 610 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
16376088 16376088 PRJNA376117_P_NODE_17113_length_333_cov_1.776923_g16811_i0 PRJNA376117 17113 333 1.776923 5.91715359 Fungi 4751 Fungi Fungi 259 1.72e-64   NTclustered gi|2323744680|ref|XM_051565994.1| 64574 g16811 i0 81.138 80.3423423423423 334 53 99 7 1 332 407 82 Radiomyces spectabilis 40S ribosomal protein S5 (BYT42DRAFT_548131), partial mRNA blastn 26754 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
19525630 19525630 PRJNA376117_P_NODE_21196_length_300_cov_1.356828_g20894_i0 PRJNA376117 21196 300 1.356828 4.070484 Rhizophagus irregularis 588596 Fungi Fungi 255 1.98e-63   NTclustered gi|2749794728|ref|XM_025316080.2| 588596 g20894 i0 82.867 44.8933333333333 286 47 95 2 1 285 684 968 Rhizophagus irregularis uncharacterized protein (OCT59_001933), mRNA blastn 13468 255 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
19525782 19525782 PRJNA376117_P_NODE_31716_length_258_cov_1.664865_g31414_i0 PRJNA376117 31716 258 1.664865 4.2953517 Rhizopus arrhizus 64495 Fungi Fungi 477 3.2699999999999985e-130   NTclustered gi|58578599|ref|NC_006836.1| 64495 g31414 i0 100 57.3255813953488 258 0 100 0 1 258 700 443 Rhizopus oryzae mitochondrion, complete genome blastn 14790 477 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
20801351 20801351 PRJNA376117_P_NODE_29037_length_268_cov_2.076923_g28735_i0 PRJNA376117 29037 268 2.076923 5.56615364 Rhizopus delemar 936053 Fungi Fungi 167 8.4e-37   NTclustered gi|2797431570|ref|XM_067658908.1| 246409 g28735 i0 92.373 12.1902985074627 118 8 44 1 4 121 257 141 Rhizopus delemar RA 99-880 40S ribosomal protein S23 (RO3G_04318), partial mRNA blastn 3267 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;