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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA376117 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4901518 4901518 PRJNA376117_P_NODE_12144_length_389_cov_1.174051_g11842_i0 PRJNA376117 12144 389 1.174051 4.56705839 Naegleria 5761 Heterolobosea other_Eukaryota 224 7.44e-54   NTclustered gi|2031946985|emb|OD958550.1| 5763 g11842 i0 82.051 37.9640102827763 273 39 70 7 1 271 3017 3281 Naegleria fowleri Karachi_NF001 strain blastn 14768 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
4901659 4901659 PRJNA376117_P_NODE_32004_length_257_cov_1.673913_g31702_i0 PRJNA376117 32004 257 1.673913 4.30195641 Naegleria 5761 Heterolobosea other_Eukaryota 475 1.1699999999999999e-129   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31702 i0 100 98.1712062256809 257 0 100 0 1 257 1781 1525 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 25230 475 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6176766 6176766 PRJNA376117_P_NODE_4365_length_658_cov_4.367521_g4075_i0 PRJNA376117 4365 658 4.367521 28.73828818 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 518 5.37e-142   NTclustered gi|290988765|ref|XM_002677018.1| 5762 g4075 i0 83.483 78.6337386018237 557 91 85 1 3 559 17 572 Naegleria gruberi alpha-tubulin (NAEGRDRAFT_88210), partial mRNA blastn 51741 518 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8053101 8053101 PRJNA376117_P_NODE_27867_length_272_cov_3.010050_g27565_i0 PRJNA376117 27867 272 3.01005 8.187336 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 237 6.42e-58   NTclustered gi|2119429492|ref|XM_044701888.1| 5763 g27565 i0 82.353 165.746323529412 272 48 100 0 1 272 527 256 Naegleria fowleri uncharacterized protein (FDP41_011476), partial mRNA blastn 45083 237 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10001769 10001769 PRJNA376117_P_NODE_20628_length_304_cov_1.480519_g20326_i0 PRJNA376117 20628 304 1.480519 4.50077776 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 302 2.55e-77   NTclustered gi|290980684|ref|XM_002673016.1| 5762 g20326 i0 85.274 15.3618421052632 292 43 96 0 11 302 957 666 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56300), mRNA blastn 4670 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10603428 10603428 PRJNA376117_P_NODE_14609_length_358_cov_3.200000_g14307_i0 PRJNA376117 14609 358 3.2 11.456 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 159 1.9399999999999993e-34   NTclustered gi|2124402788|ref|XM_044685796.1| 51637 g14307 i0 80.66 0.706703910614525 212 35 58 6 29 237 43 251 Naegleria lovaniensis uncharacterized protein (C9374_010270), partial mRNA blastn 253 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
11276835 11276835 PRJNA376117_P_NODE_17929_length_326_cov_1.806324_g17627_i0 PRJNA376117 17929 326 1.806324 5.88861624 Naegleria 5761 Heterolobosea other_Eukaryota 601 2.43e-167   NTclustered gi|2289385106|gb|OP297026.1| 5762 g17627 i0 100 99.6319018404908 325 0 99 0 2 326 656 332 Naegleria gruberi strain 3HKMJS1 small subunit ribosomal RNA gene, partial sequence blastn 32480 601 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13153727 13153727 PRJNA376117_P_NODE_34651_length_250_cov_1.570621_g34349_i0 PRJNA376117 34651 250 1.570621 3.9265525 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 122 1.7e-23   NTclustered gi|2124400332|ref|XM_044699170.1| 51637 g34349 i0 85.47 15.024 117 17 47 0 70 186 138 22 Naegleria lovaniensis uncharacterized protein (C9374_009028), partial mRNA blastn 3756 122 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
18251498 18251498 PRJNA376117_P_NODE_28155_length_271_cov_2.065657_g27853_i0 PRJNA376117 28155 271 2.065657 5.59793047 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.84e-33   NTclustered gi|290974050|ref|XM_002669714.1| 5762 g27853 i0 89.516 30.4833948339483 124 11 45 2 149 271 819 697 Naegleria gruberi polyubiquitin (NAEGRDRAFT_83338), partial mRNA blastn 8261 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18251760 18251760 PRJNA376117_P_NODE_4415_length_654_cov_1.793460_g4124_i0 PRJNA376117 4415 654 1.79346 11.7292284 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 486 1.5099999999999994e-132   NTclustered gi|2031931837|emb|OD956609.1| 5763 g4124 i0 80.094 89.9984709480122 638 120 97 5 22 654 924 1559 Naegleria fowleri Karachi_NF001 strain blastn 58859 486 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23352140 23352140 PRJNA376117_P_NODE_779_length_2303_cov_2.956054_g672_i0 PRJNA376117 779 2303 2.956054 68.077923620000007 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 843 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g672 i0 82.092 23.5488493269648 1061 121 54 48 646 1669 2556 3584 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 54233 843 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;