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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4226846 4226846 PRJNA376117_P_NODE_15124_length_352_cov_2.204301_g14822_i0 PRJNA376117 15124 352 2.204301 7.75913952 Polychytrium aggregatum 110093 Fungi Fungi 202 3.119999999999999e-47   NTclustered gi|2432155304|ref|XM_053111518.1| 110093 g14822 i0 79.783 11.4573863636364 277 56 79 0 72 348 326 50 Polychytrium aggregatum ribosomal L27e protein family-domain-containing protein (BJ171DRAFT_510919), mRNA blastn 4033 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5503275 5503275 PRJNA376117_P_NODE_16325_length_340_cov_5.378277_g16023_i0 PRJNA376117 16325 340 5.378277 18.2861418 Fimicolochytrium jonesii 1396493 Fungi Fungi 148 3.98e-31   NTclustered gi|2432050258|ref|XM_053069071.1| 1396493 g16023 i0 83.03 34.0411764705882 165 26 48 2 101 264 325 162 Fimicolochytrium jonesii component of cytosolic 80S ribosome and 40S small subunit (EV422DRAFT_512505), mRNA blastn 11574 148 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
6777284 6777284 PRJNA376117_P_NODE_10006_length_425_cov_1.812500_g9704_i0 PRJNA376117 10006 425 1.8125 7.703125 Polychytrium aggregatum 110093 Fungi Fungi 315 4.73e-81   NTclustered gi|2432158512|ref|XM_053111712.1| 110093 g9704 i0 81.17 70.7294117647059 393 72 92 2 23 414 150 541 Polychytrium aggregatum 40S ribosomal protein S13 (BJ171DRAFT_513016), mRNA blastn 30060 315 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9327980 9327980 PRJNA376117_P_NODE_28548_length_270_cov_1.563452_g28246_i0 PRJNA376117 28548 270 1.563452 4.2213204 Spizellomyces punctatus 109760 Fungi Fungi 220 6.41e-53   NTclustered gi|1026947816|ref|XM_016748429.1| 645134 g28246 i0 81.618 47.8962962962963 272 44 99 6 1 269 1123 855 Spizellomyces punctatus DAOM BR117 ATP-dependent RNA helicase eIF4A (SPPG_00092), mRNA blastn 12932 220 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
10001758 10001758 PRJNA376117_P_NODE_19328_length_314_cov_1.917012_g19026_i0 PRJNA376117 19328 314 1.917012 6.01941768 Fungi 4751 Fungi Fungi 357 5.56e-94   NTclustered gi|53829559|gb|AY582832.1| 64517 g19026 i0 87.22 100.363057324841 313 40 99 0 1 313 1158 846 Rhizophlyctis rosea strain CBS 57684 HSP70 gene, partial cds blastn 31514 357 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
10603639 10603639 PRJNA376117_P_NODE_30129_length_264_cov_1.612565_g29827_i0 PRJNA376117 30129 264 1.612565 4.2571716 Polychytrium aggregatum 110093 Fungi Fungi 187 6.34e-43   NTclustered gi|2432174060|ref|XM_053106822.1| 110093 g29827 i0 81.197 84.6212121212121 234 42 88 2 7 239 638 870 Polychytrium aggregatum nucleotide-diphospho-sugar transferase (BJ171DRAFT_272837), mRNA blastn 22340 187 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
11276884 11276884 PRJNA376117_P_NODE_23829_length_286_cov_2.169014_g23527_i0 PRJNA376117 23829 286 2.169014 6.20338004 Fungi 4751 Fungi Fungi 274 5.18e-69   NTclustered gi|358030871|dbj|AB609169.1| 281842 g23527 i0 84.083 98.2377622377622 289 40 100 6 1 286 1729 1444 Entophlyctis helioformis EF2 gene for translation elongation factor 2, partial cds, isolate: AFTOL-ID 40 blastn 28096 274 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis helioformis
13153617 13153617 PRJNA376117_P_NODE_26251_length_278_cov_1.848780_g25949_i0 PRJNA376117 26251 278 1.84878 5.1396084 Polychytrium aggregatum 110093 Fungi Fungi 115 3.2200000000000003e-21   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g25949 i0 80.795 1.39208633093525 151 25 54 2 46 194 1088 940 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 387 115 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17651199 17651199 PRJNA376117_P_NODE_15674_length_347_cov_1.124088_g15372_i0 PRJNA376117 15674 347 1.124088 3.90058536 Fungi 4751 Fungi Fungi 279 1.38e-70   NTclustered gi|2432162155|ref|XM_053113596.1| 110093 g15372 i0 86.538 72.0951008645533 260 28 73 2 95 347 1521 1262 Polychytrium aggregatum translation elongation factor EF-1 alpha (BJ171DRAFT_569936), mRNA blastn 25017 279 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19525498 19525498 PRJNA376117_P_NODE_12356_length_385_cov_2.689103_g12054_i0 PRJNA376117 12356 385 2.689103 10.35304655 Polychytrium aggregatum 110093 Fungi Fungi 176 2.09e-39   NTclustered gi|2432155304|ref|XM_053111518.1| 110093 g12054 i0 79.283 8.76363636363636 251 52 65 0 30 280 49 299 Polychytrium aggregatum ribosomal L27e protein family-domain-containing protein (BJ171DRAFT_510919), mRNA blastn 3374 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20801140 20801140 PRJNA376117_P_NODE_12597_length_382_cov_1.744337_g12295_i0 PRJNA376117 12597 382 1.744337 6.66336734 Polychytrium aggregatum 110093 Fungi Fungi 278 5.52e-70   NTclustered gi|2432144496|ref|XM_053115856.1| 110093 g12295 i0 80.912 19.8848167539267 351 67 92 0 1 351 461 111 Polychytrium aggregatum small GTPase superfamily (BJ171DRAFT_72758), mRNA blastn 7596 278 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20801226 20801226 PRJNA376117_P_NODE_20217_length_307_cov_2.123932_g19915_i0 PRJNA376117 20217 307 2.123932 6.52047124 Polychytrium aggregatum 110093 Fungi Fungi 115 3.6e-21   NTclustered gi|2432150000|ref|XM_053114178.1| 110093 g19915 i0 82.014 1.37785016286645 139 22 44 1 3 138 502 640 Polychytrium aggregatum ribosomal protein S2, flavodoxin-like domain-containing protein (BJ171DRAFT_582387), partial mRNA blastn 423 115 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22750385 22750385 PRJNA376117_P_NODE_10638_length_412_cov_3.619469_g10336_i0 PRJNA376117 10638 412 3.619469 14.91221228 Opisthokonta 33154 Fungi Fungi 148 4.91e-31   NTclustered gi|82398309|gb|DQ273787.1| 64517 g10336 i0 98.795 33.2378640776699 83 1 38 0 10 92 2236 2154 Rhizophlyctis rosea isolate AFTOL-ID 43 28S ribosomal RNA gene, partial sequence blastn 13694 148 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
23352124 23352124 PRJNA376117_P_NODE_5779_length_562_cov_3.141104_g5480_i0 PRJNA376117 5779 562 3.141104 17.65300448 Polychytrium aggregatum 110093 Fungi Fungi 368 4.84e-97   NTclustered gi|2432134333|ref|XM_053109764.1| 110093 g5480 i0 78.761 95.1281138790036 565 108 99 11 4 562 639 81 Polychytrium aggregatum 60S ribosomal protein I1-a (BJ171DRAFT_491703), mRNA blastn 53462 368 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23352145 23352145 PRJNA376117_P_NODE_8559_length_459_cov_1.730570_g8257_i0 PRJNA376117 8559 459 1.73057 7.9433163 Fimicolochytrium jonesii 1396493 Fungi Fungi 235 4.12e-57   NTclustered gi|2432051426|ref|XM_053072055.1| 1396493 g8257 i0 78.32 16.3006535947712 369 76 80 4 55 421 735 369 Fimicolochytrium jonesii ribosomal family S4e-domain-containing protein (EV422DRAFT_563332), partial mRNA blastn 7482 235 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;