RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8053226 8053226 PRJNA376117_P_NODE_36147_length_249_cov_0.875000_g35845_i0 PRJNA376117 36147 249 0.875 2.17875 Hirudo verbana 311461 Annelida Annelida 62.1 3.74e-5   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g35845 i0 95 2.20080321285141 40 0 16 2 55 93 777862 777900 Hirudo verbana genome assembly, chromosome: 3 blastn 548 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22750575 22750575 PRJNA376117_P_NODE_33038_length_253_cov_1.711111_g32736_i0 PRJNA376117 33038 253 1.711111 4.32911083 Megascolecidae 6400 Annelida Annelida 425 1.17e-114   NTclustered gi|1446066788|dbj|LC259253.1| 1982487 g32736 i0 100 81.4545454545455 230 0 91 0 24 253 1 230 Pithemera sp. Samar gene for 28S rRNA, partial sequence blastn 20608 425 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Megascolecidae Pithemera Pithemera sp. Samar

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;