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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA376117" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 28 ✖

bioproject 1

  • PRJNA376117 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1674424 1674424 PRJNA376117_P_NODE_19442_length_313_cov_3.041667_g19140_i0 PRJNA376117 19442 313 3.041667 9.52041771 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 538 1.8399999999999993e-148   NTclustered gi|427188203|dbj|AB757707.1| 56466 g19140 i0 97.749 16.2140575079872 311 7 99 0 1 311 64 374 Peranema trichophorum vatb mRNA for V-type ATPase V1 subunit B, partial cds, strain: K-01 blastn 5075 538 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
2950450 2950450 PRJNA376117_P_NODE_25823_length_280_cov_1.202899_g25521_i0 PRJNA376117 25823 280 1.202899 3.3681172 Euglena agilis 96764 Euglenozoa other_Eukaryota 198 3.13e-46   NTclustered gi|1020992084|gb|KT984750.1| 96764 g25521 i0 81.78 50.4535714285714 236 43 84 0 45 280 33 268 Euglena agilis strain ACOI 2970 clone B heat shock protein 90 (hsp90) mRNA, complete cds blastn 14127 198 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena agilis
4901518 4901518 PRJNA376117_P_NODE_12144_length_389_cov_1.174051_g11842_i0 PRJNA376117 12144 389 1.174051 4.56705839 Naegleria 5761 Heterolobosea other_Eukaryota 224 7.44e-54   NTclustered gi|2031946985|emb|OD958550.1| 5763 g11842 i0 82.051 37.9640102827763 273 39 70 7 1 271 3017 3281 Naegleria fowleri Karachi_NF001 strain blastn 14768 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
4901659 4901659 PRJNA376117_P_NODE_32004_length_257_cov_1.673913_g31702_i0 PRJNA376117 32004 257 1.673913 4.30195641 Naegleria 5761 Heterolobosea other_Eukaryota 475 1.1699999999999999e-129   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31702 i0 100 98.1712062256809 257 0 100 0 1 257 1781 1525 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 25230 475 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5503337 5503337 PRJNA376117_P_NODE_20905_length_302_cov_1.672489_g20603_i0 PRJNA376117 20905 302 1.672489 5.05091678 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 222 2.03e-53   NTclustered gi|118738152|gb|EF114757.1| 56466 g20603 i0 98.413 0.417218543046358 126 2 42 0 177 302 1591 1466 Peranema trichophorum pyruvate:NADP+ oxidoreductase (pno) mRNA, partial cds blastn 126 222 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
6176766 6176766 PRJNA376117_P_NODE_4365_length_658_cov_4.367521_g4075_i0 PRJNA376117 4365 658 4.367521 28.73828818 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 518 5.37e-142   NTclustered gi|290988765|ref|XM_002677018.1| 5762 g4075 i0 83.483 78.6337386018237 557 91 85 1 3 559 17 572 Naegleria gruberi alpha-tubulin (NAEGRDRAFT_88210), partial mRNA blastn 51741 518 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8053101 8053101 PRJNA376117_P_NODE_27867_length_272_cov_3.010050_g27565_i0 PRJNA376117 27867 272 3.01005 8.187336 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 237 6.42e-58   NTclustered gi|2119429492|ref|XM_044701888.1| 5763 g27565 i0 82.353 165.746323529412 272 48 100 0 1 272 527 256 Naegleria fowleri uncharacterized protein (FDP41_011476), partial mRNA blastn 45083 237 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
8726426 8726426 PRJNA376117_P_NODE_37667_length_247_cov_3.241379_g37365_i0 PRJNA376117 37667 247 3.241379 8.00620613 Entosiphon 101492 Euglenozoa other_Eukaryota 187 5.87e-43   NTclustered gi|37542663|gb|AY061999.1| 101493 g37365 i0 94.262 4.16194331983806 122 7 49 0 3 124 1596 1717 Entosiphon sulcatum small subunit ribosomal RNA gene, partial sequence blastn 1028 187 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
9328271 9328271 PRJNA376117_P_NODE_8048_length_472_cov_3.180451_g7747_i0 PRJNA376117 8048 472 3.180451 15.01172872 Peranema sp. CB 131838 1759665 Euglenozoa other_Eukaryota 643 5.949999999999998e-180   NTclustered gi|959455953|gb|KT588860.1| 1759665 g7747 i0 100 9.66737288135593 348 0 74 0 1 348 348 1 Peranema sp. CB 131838 glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds blastn 4563 643 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema sp. CB 131838
10001769 10001769 PRJNA376117_P_NODE_20628_length_304_cov_1.480519_g20326_i0 PRJNA376117 20628 304 1.480519 4.50077776 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 302 2.55e-77   NTclustered gi|290980684|ref|XM_002673016.1| 5762 g20326 i0 85.274 15.3618421052632 292 43 96 0 11 302 957 666 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56300), mRNA blastn 4670 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10603428 10603428 PRJNA376117_P_NODE_14609_length_358_cov_3.200000_g14307_i0 PRJNA376117 14609 358 3.2 11.456 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 159 1.9399999999999993e-34   NTclustered gi|2124402788|ref|XM_044685796.1| 51637 g14307 i0 80.66 0.706703910614525 212 35 58 6 29 237 43 251 Naegleria lovaniensis uncharacterized protein (C9374_010270), partial mRNA blastn 253 159 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
11276835 11276835 PRJNA376117_P_NODE_17929_length_326_cov_1.806324_g17627_i0 PRJNA376117 17929 326 1.806324 5.88861624 Naegleria 5761 Heterolobosea other_Eukaryota 601 2.43e-167   NTclustered gi|2289385106|gb|OP297026.1| 5762 g17627 i0 100 99.6319018404908 325 0 99 0 2 326 656 332 Naegleria gruberi strain 3HKMJS1 small subunit ribosomal RNA gene, partial sequence blastn 32480 601 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12552096 12552096 PRJNA376117_P_NODE_10450_length_416_cov_1.927114_g10148_i0 PRJNA376117 10450 416 1.927114 8.01679424 Decastava 1911741 Euglenozoa other_Eukaryota 765 0   NTclustered gi|937541987|gb|KP306753.1| 1732396 g10148 i0 100 75.8581730769231 414 0 99 0 1 414 1697 2110 Decastava edaphica strain CCAP 1265/2 18S ribosomal RNA gene, partial sequence blastn 31557 765 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava edaphica
13153450 13153450 PRJNA376117_P_NODE_15331_length_350_cov_1.664260_g15029_i0 PRJNA376117 15331 350 1.66426 5.82491 Peranema sp. CB 131838 1759665 Euglenozoa other_Eukaryota 553 7.429999999999998e-153   NTclustered gi|959456119|gb|KT718639.1| 1759665 g15029 i0 95.143 5.96285714285714 350 17 100 0 1 350 615 266 Peranema sp. CB 131838 triosephosphate isomerase isoform 2 mRNA, partial cds blastn 2087 553 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema sp. CB 131838
13153727 13153727 PRJNA376117_P_NODE_34651_length_250_cov_1.570621_g34349_i0 PRJNA376117 34651 250 1.570621 3.9265525 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 122 1.7e-23   NTclustered gi|2124400332|ref|XM_044699170.1| 51637 g34349 i0 85.47 15.024 117 17 47 0 70 186 138 22 Naegleria lovaniensis uncharacterized protein (C9374_009028), partial mRNA blastn 3756 122 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
14428444 14428444 PRJNA376117_P_NODE_1572_length_1286_cov_4.392415_g1375_i0 PRJNA376117 1572 1286 4.392415 56.4864569 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1888 0   NTclustered gi|427188201|dbj|AB757706.1| 56466 g1375 i0 99.613 10.4129082426128 1034 4 80 0 1 1034 1034 1 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 13391 1888 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18251317 18251317 PRJNA376117_P_NODE_1495_length_1344_cov_4.992132_g1303_i0 PRJNA376117 1495 1344 4.992132 67.09425408 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1851 0   NTclustered gi|226347408|gb|FJ807243.1| 56466 g1303 i0 91.686 88.2864583333333 1323 110 98 0 1 1323 1323 1 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 118657 1851 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18251418 18251418 PRJNA376117_P_NODE_2235_length_1002_cov_2.256189_g1988_i0 PRJNA376117 2235 1002 2.256189 22.60701378 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 865 0   NTclustered gi|110589646|gb|DQ683345.1| 56466 g1988 i0 95.88 53.8602794411178 534 22 100 0 1 534 1819 1286 Peranema trichophorum Hsp90 gene, partial cds blastn 53968 865 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
18251498 18251498 PRJNA376117_P_NODE_28155_length_271_cov_2.065657_g27853_i0 PRJNA376117 28155 271 2.065657 5.59793047 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.84e-33   NTclustered gi|290974050|ref|XM_002669714.1| 5762 g27853 i0 89.516 30.4833948339483 124 11 45 2 149 271 819 697 Naegleria gruberi polyubiquitin (NAEGRDRAFT_83338), partial mRNA blastn 8261 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18251760 18251760 PRJNA376117_P_NODE_4415_length_654_cov_1.793460_g4124_i0 PRJNA376117 4415 654 1.79346 11.7292284 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 486 1.5099999999999994e-132   NTclustered gi|2031931837|emb|OD956609.1| 5763 g4124 i0 80.094 89.9984709480122 638 120 97 5 22 654 924 1559 Naegleria fowleri Karachi_NF001 strain blastn 58859 486 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20801142 20801142 PRJNA376117_P_NODE_1277_length_1508_cov_20.208362_g1103_i0 PRJNA376117 1277 1508 20.208362 304.74209896 uncultured Peranema sp. 1980988 Euglenozoa other_Eukaryota 2747 0   NTclustered gi|1182637172|gb|KY963139.1| 1980988 g1103 i0 99.536 38.8454907161804 1507 6 99 1 1 1507 659 2164 Uncultured Peranema sp. clone SP1 small subunit ribosomal RNA gene, partial sequence blastn 58579 2747 1 Eukaryota Discoba   Euglenozoa Euglenida       uncultured Peranema sp.
20801147 20801147 PRJNA376117_P_NODE_13237_length_374_cov_8.817276_g12935_i0 PRJNA376117 13237 374 8.817276 32.97661224 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 243 1.97e-59   NTclustered gi|2787689949|ref|XM_067335212.1| 715481 g12935 i0 83.525 6.35026737967914 261 41 70 2 86 345 278 19 Trypanosoma melophagium Kinetoplastid membrane protein 11 (LSM04_003588), partial mRNA blastn 2375 243 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
20801186 20801186 PRJNA376117_P_NODE_17537_length_329_cov_5.398438_g17235_i0 PRJNA376117 17537 329 5.398438 17.76086102 Peranema sp. CB 131838 1759665 Euglenozoa other_Eukaryota 466 9.33e-127   NTclustered gi|959455953|gb|KT588860.1| 1759665 g17235 i0 98.485 11.9392097264438 264 4 80 0 1 264 700 963 Peranema sp. CB 131838 glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds blastn 3928 466 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema sp. CB 131838
22076261 22076261 PRJNA376117_P_NODE_2018_length_1069_cov_3.411647_g1785_i0 PRJNA376117 2018 1069 3.411647 36.47050643 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1628 0   NTclustered gi|226347408|gb|FJ807243.1| 56466 g1785 i0 93.931 44.5902712815716 1071 60 100 4 1 1069 1441 374 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 47667 1628 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22750524 22750524 PRJNA376117_P_NODE_27238_length_275_cov_1.311881_g26936_i0 PRJNA376117 27238 275 1.311881 3.60767275 Entosiphon 101492 Euglenozoa other_Eukaryota 230 1.0899999999999995e-55   NTclustered gi|41400272|gb|AY425008.1| 259048 g26936 i0 84.388 3.44727272727273 237 33 86 2 39 275 1843 2075 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 948 230 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
23352140 23352140 PRJNA376117_P_NODE_779_length_2303_cov_2.956054_g672_i0 PRJNA376117 779 2303 2.956054 68.077923620000007 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 843 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g672 i0 82.092 23.5488493269648 1061 121 54 48 646 1669 2556 3584 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 54233 843 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
24626415 24626415 PRJNA376117_P_NODE_640_length_2827_cov_19.432825_g557_i0 PRJNA376117 640 2827 19.432825 549.36596275 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 2366 0   NTclustered gi|27461806|gb|AY130826.1| 56466 g557 i0 99.614 9.74460558896357 1297 4 46 1 1488 2783 1297 1 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 27548 2366 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
25299894 25299894 PRJNA376117_P_NODE_26560_length_277_cov_1.887255_g26258_i0 PRJNA376117 26560 277 1.887255 5.22769635 Entosiphon 101492 Euglenozoa other_Eukaryota 512 9.73e-141   NTclustered gi|41400272|gb|AY425008.1| 259048 g26258 i0 100 4.32490974729242 277 0 100 0 1 277 1745 2021 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 1198 512 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;