RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA371613" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

bioproject 1

  • PRJNA371613 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11878261 11878261 PRJNA371613_P_NODE_6170_length_186_cov_1.718121_g5994_i0 PRJNA371613 6170 186 1.718121 3.19570506 Bacteriophage sp. 38018 Viruses Viruses 316 5.11e-82   NTclustered gi|2294894992|gb|OP076158.1| 38018 g5994 i0 97.326 17.9139784946237 187 3 100 2 1 186 20249 20064 MAG: Bacteriophage sp. isolate 4229_41278, partial genome blastn 3332 316 1 Viruses               Bacteriophage sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;