RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA371613" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA371613 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1073519 1073519 PRJNA371613_P_NODE_5721_length_195_cov_0.962025_g5545_i0 PRJNA371613 5721 195 0.962025 1.87594875 Tremellales 5234 Fungi Fungi 350 5.34e-92   NTclustered gi|363497964|gb|JN400745.1| 4972 g5545 i0 98.974 99.9435897435897 195 2 100 0 1 195 216 22 Dioszegia hungarica isolate TP-Snow-Y4 26S ribosomal RNA gene, partial sequence blastn 19489 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
2950167 2950167 PRJNA371613_P_NODE_2763_length_335_cov_4.382550_g2587_i0 PRJNA371613 2763 335 4.38255 14.6815425 Malassezia restricta 76775 Fungi Fungi 457 5.729999999999999e-124   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2587 i0 91.964 88.8208955223881 336 12 100 11 1 335 3318 2997 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 29755 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7451426 7451426 PRJNA371613_P_NODE_8446_length_165_cov_3.703125_g8270_i0 PRJNA371613 8446 165 3.703125 6.11015625 Malassezia 55193 Fungi Fungi 305 9.59e-79   NTclustered gi|953821272|gb|KT310070.1| 76773 g8270 i0 100 100.012121212121 165 0 100 0 1 165 679 843 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 16502 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
8052790 8052790 PRJNA371613_P_NODE_5287_length_206_cov_1.721893_g5111_i0 PRJNA371613 5287 206 1.721893 3.54709958 Lentinula edodes 5353 Fungi Fungi 381 2.0199999999999994e-101   NTclustered gi|2723225103|dbj|LC813565.1| 5353 g5111 i0 100 100.834951456311 206 0 100 0 1 206 9346 9141 Lentinula edodes BCRC:MU30948 DNA, clone Type1 blastn 20772 381 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
11878259 11878259 PRJNA371613_P_NODE_4370_length_236_cov_2.085427_g4194_i0 PRJNA371613 4370 236 2.085427 4.92160772 Cystofilobasidium capitatum 5412 Fungi Fungi 392 1.0999999999999999e-104   NTclustered gi|501438057|gb|FJ644524.2| 5412 g4194 i0 96.61 107.029661016949 236 8 100 0 1 236 1419 1654 Cystofilobasidium capitatum voucher 01/04 28S ribosomal RNA gene, partial sequence blastn 25259 392 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium capitatum
12552044 12552044 PRJNA371613_P_NODE_2670_length_344_cov_3.306189_g2494_i0 PRJNA371613 2670 344 3.306189 11.37329016 Malassezia 55193 Fungi Fungi 630 3.289999999999999e-176   NTclustered gi|915512591|gb|KP825374.1| 76773 g2494 i0 99.709 97.9040697674419 344 1 100 0 1 344 301 644 Malassezia globosa strain ISOSEB48F 28S ribosomal RNA gene, partial sequence blastn 33679 630 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
13826910 13826910 PRJNA371613_P_NODE_2031_length_417_cov_13.255263_g1856_i0 PRJNA371613 2031 417 13.255263 55.27444671 root 1 Root_unresolved Root_unresolved 765 0   NTclustered gi|1546635596|ref|XR_003525368.1| 76775 g1856 i0 99.76 100 417 1 100 0 1 417 742 1158 Malassezia restricta 18S ribosomal RNA (MRET_r0002), rRNA blastn 41700 765 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15702263 15702263 PRJNA371613_P_NODE_5353_length_204_cov_2.383234_g5177_i0 PRJNA371613 5353 204 2.383234 4.86179736 Malassezia restricta 76775 Fungi Fungi 366 5.599999999999998e-97   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g5177 i0 99.02 100.303921568627 204 2 100 0 1 204 1742 1945 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 20462 366 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15702279 15702279 PRJNA371613_P_NODE_7753_length_169_cov_0.969697_g7577_i0 PRJNA371613 7753 169 0.969697 1.63878793 Malassezia restricta 76775 Fungi Fungi 255 1e-63   NTclustered gi|1546637397|ref|XM_027630341.1| 76775 g7577 i0 100 1.52662721893491 138 0 82 0 32 169 157 20 Malassezia restricta myosin regulatory light chain cdc4 (MRET_3714), partial mRNA blastn 258 255 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;