RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA358490" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA358490 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5502587 5502587 PRJNA358490_P_NODE_15465_length_176_cov_2.138686_g15121_i0 PRJNA358490 15465 176 2.138686 3.76408736 Desulfobacterales bacterium 2044940 Bacteria Bacteria 52.8 0.015   NTclustered gi|2621704724|emb|OY762071.1| 2044940 g15121 i0 96.774 0.670454545454545 31 1 18 0 87 117 678615 678585 MAG: Desulfobacterales bacterium isolate 06740738-a7bd-4baa-85b3-74b223bbbbd0 genome assembly, chromosome: 1 blastn 118 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
6776630 6776630 PRJNA358490_P_NODE_15866_length_171_cov_2.090909_g15522_i0 PRJNA358490 15866 171 2.090909 3.57545439 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 137 3.84e-28   NTclustered gi|2893358418|emb|OZ220710.1| 2202153 g15522 i0 83.23 85.5438596491228 161 15 91 9 3 157 4106487 4106333 MAG: Thermodesulfobacteriota bacterium isolate dce1034a-8f23-488c-aa07-39e6c80a0035 genome assembly, chromosome: 1 blastn 14628 137 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;