contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA358490" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 399091 | 399091 | PRJNA358490_P_NODE_4381_length_669_cov_106.001587_g4129_i0 | PRJNA358490 | 4381 | 669 | 106.001587 | 709.15061703 | Calothrix sp. NIES-4101 | 2005461 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|1210217881|dbj|AP018280.1| | 2005461 | g4129 | i0 | 90.274 | 142.14798206278 | 658 | 62 | 98 | 2 | 13 | 669 | 1243701 | 1243045 | Calothrix sp. NIES-4101 DNA, complete genome | blastn | 95097 | 859 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Calotrichaceae | Calothrix | Calothrix sp. NIES-4101 | |
| 1073213 | 1073213 | PRJNA358490_P_NODE_1441_length_1128_cov_56.377410_g1317_i1 | PRJNA358490 | 1441 | 1128 | 56.37741 | 635.9371848 | Thermoleptolyngbya | 2303528 | Bacteria | Bacteria | 1581 | 0 | NTclustered | gi|2592622306|gb|CP053540.1| | 2547457 | g1317 | i1 | 92.185 | 146.130319148936 | 1126 | 77 | 99 | 10 | 1 | 1119 | 312944 | 311823 | Thermoleptolyngbya oregonensis NK1-22 chromosome, complete genome | blastn | 164835 | 1581 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Thermoleptolyngbya | Thermoleptolyngbya oregonensis | |
| 10001339 | 10001339 | PRJNA358490_P_NODE_14748_length_186_cov_1.653061_g14404_i0 | PRJNA358490 | 14748 | 186 | 1.653061 | 3.07469346 | root | 1 | Root_unresolved | Root_unresolved | 303 | 3.98e-78 | NTclustered | gi|192337829|gb|EU751438.1| | 1211 | g14404 | i0 | 99.405 | 90.0967741935484 | 168 | 0 | 90 | 1 | 20 | 186 | 488 | 655 | Uncultured cyanobacterium clone HK05-E01 16S ribosomal RNA gene, partial sequence | blastn | 16758 | 303 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 12551775 | 12551775 | PRJNA358490_P_NODE_9230_length_373_cov_7.104790_g1317_i3 | PRJNA358490 | 9230 | 373 | 7.10479 | 26.5008667 | Nodosilinea | 1120752 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|2095813679|gb|OK161231.1| | 2876719 | g1317 | i3 | 98.391 | 186.495978552279 | 373 | 6 | 100 | 0 | 1 | 373 | 2423 | 2795 | Nodosilinea sp. 2.2B 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 69563 | 656 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea sp. 2.2B | |
| 13152721 | 13152721 | PRJNA358490_P_NODE_16931_length_161_cov_1.672131_g16587_i0 | PRJNA358490 | 16931 | 161 | 1.672131 | 2.69213091 | Aliterella chasmolithica | 2739056 | Bacteria | Bacteria | 244 | 2.06e-60 | NTclustered | gi|1713066352|gb|MN243145.1| | 2599943 | g16587 | i0 | 94.375 | 129.055900621118 | 160 | 8 | 99 | 1 | 1 | 159 | 1970 | 2129 | Aliterella chasmolithica PJ S15 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 20778 | 244 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella chasmolithica | |
| 13826597 | 13826597 | PRJNA358490_P_NODE_1431_length_1132_cov_14.558097_g1317_i0 | PRJNA358490 | 1431 | 1132 | 14.558097 | 164.79765804 | Nodosilinea | 1120752 | Bacteria | Bacteria | 1962 | 0 | NTclustered | gi|2095813679|gb|OK161231.1| | 2876719 | g1317 | i0 | 98.387 | 147.943462897527 | 1116 | 18 | 99 | 0 | 17 | 1132 | 3546 | 2431 | Nodosilinea sp. 2.2B 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 167472 | 1962 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea sp. 2.2B | |
| 15100979 | 15100979 | PRJNA358490_P_NODE_1372_length_1148_cov_65.611362_g1265_i0 | PRJNA358490 | 1372 | 1148 | 65.611362 | 753.21843576 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 1567 | 0 | NTclustered | gi|225696224|gb|FJ805891.1| | 259957 | g1265 | i0 | 92.246 | 159.952961672474 | 1122 | 61 | 97 | 21 | 23 | 1133 | 1918 | 3024 | Uncultured Chroococcidiopsis sp. clone NA2_5 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 183626 | 1567 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 15701593 | 15701593 | PRJNA358490_P_NODE_10753_length_296_cov_5.603113_g10411_i0 | PRJNA358490 | 10753 | 296 | 5.603113 | 16.58521448 | Leptolyngbya sp. 7M | 2812896 | Bacteria | Bacteria | 436 | 6.489999999999999e-118 | NTclustered | gi|2028908486|gb|CP070897.1| | 2812896 | g10411 | i0 | 95.273 | 98.9763513513514 | 275 | 13 | 93 | 0 | 1 | 275 | 2150699 | 2150425 | Leptolyngbya sp. 7M chromosome | blastn | 29297 | 436 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbya | Leptolyngbya sp. 7M | |
| 18924698 | 18924698 | PRJNA358490_P_NODE_4495_length_659_cov_96.956452_g1317_i2 | PRJNA358490 | 4495 | 659 | 96.956452 | 638.94301868 | Nodosilinea | 1120752 | Bacteria | Bacteria | 1011 | 0 | NTclustered | gi|46409896|gb|AY584521.1| | 118166 | g1317 | i2 | 94.402 | 187.497723823976 | 661 | 32 | 100 | 5 | 1 | 659 | 107 | 764 | Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence | blastn | 123561 | 1018 | 0.993123772102161 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea nodulosa | |
| 20800497 | 20800497 | PRJNA358490_P_NODE_16717_length_163_cov_1.645161_g16373_i0 | PRJNA358490 | 16717 | 163 | 1.645161 | 2.68161243 | Candidatus Gastranaerophilales bacterium | 2137880 | Bacteria | Bacteria | 169 | 1.29e-37 | NTclustered | gi|2729058672|emb|OZ006972.1| | 2137880 | g16373 | i0 | 88.971 | 4.30674846625767 | 136 | 15 | 83 | 0 | 28 | 163 | 511180 | 511045 | MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 | blastn | 702 | 169 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Gastranaerophilales | Candidatus Gastranaerophilales bacterium | ||||
| 21474859 | 21474859 | PRJNA358490_P_NODE_1117_length_1243_cov_22.587209_g1032_i0 | PRJNA358490 | 1117 | 1243 | 22.587209 | 280.75900787 | Nostocaceae | 1162 | Bacteria | Bacteria | 1437 | 0 | NTclustered | gi|1796909370|gb|CP046703.1| | 76335 | g1032 | i0 | 93.272 | 269.68543845535 | 981 | 56 | 97 | 8 | 1 | 974 | 3059908 | 3058931 | Nostoc sp. ATCC 53789 chromosome, complete genome | blastn | 335219 | 1447 | 0.993089149965446 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. ATCC 53789 | |
| 23350914 | 23350914 | PRJNA358490_P_NODE_12719_length_229_cov_1.700000_g12375_i0 | PRJNA358490 | 12719 | 229 | 1.7 | 3.893 | Nodosilinea sp. 2.2B | 2876719 | Bacteria | Bacteria | 285 | 1.85e-72 | NTclustered | gi|2095813679|gb|OK161231.1| | 2876719 | g12375 | i0 | 89.083 | 153.825327510917 | 229 | 25 | 100 | 0 | 1 | 229 | 2158 | 2386 | Nodosilinea sp. 2.2B 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 35226 | 285 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea sp. 2.2B |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;