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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA358490" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA358490 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
398978 398978 PRJNA358490_P_NODE_12781_length_227_cov_2.835106_g12437_i0 PRJNA358490 12781 227 2.835106 6.43569062 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 385 1.76e-102   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g12437 i0 100 37.4229074889868 208 0 92 0 1 208 544774 544981 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 8495 385 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
9327163 9327163 PRJNA358490_P_NODE_3188_length_803_cov_5.735602_g2981_i0 PRJNA358490 3188 803 5.735602 46.05688406 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 1188 0   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g2981 i0 93.821 258.648816936488 793 44 98 4 14 803 543272 544062 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 207695 1188 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
10602783 10602783 PRJNA358490_P_NODE_2129_length_966_cov_5.899676_g1983_i0 PRJNA358490 2129 966 5.899676 56.99087016 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 1275 0   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g1983 i0 91.568 0.957556935817805 925 76 96 2 22 945 17534 16611 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 925 1275 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
22075587 22075587 PRJNA358490_P_NODE_3578_length_755_cov_4.963687_g3354_i0 PRJNA358490 3578 755 4.963687 37.47583685 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 1358 0   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g3354 i0 100 297.572185430464 735 0 97 0 1 735 543736 544470 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 224667 1358 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;