RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA358049" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 3 ✖

bioproject 1

  • PRJNA358049 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11276351 11276351 PRJNA358049_S_NODE_10549_length_199_cov_2.320000_g10501_i0 PRJNA358049 10549 199 2.32 4.6168 Gammaretrovirus 153135 Viruses Viruses 368 1.51e-97   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g10501 i0 100 100 199 0 100 0 1 199 3755 3557 Moloney murine leukemia virus, complete genome blastn 19900 368 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
18924585 18924585 PRJNA358049_S_NODE_17435_length_165_cov_0.879310_g17387_i0 PRJNA358049 17435 165 0.87931 1.4508615 root 1 Root_unresolved Root_unresolved 305 9.59e-79   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g17387 i0 100 100 165 0 100 0 1 165 2652 2816 Moloney murine leukemia virus, complete genome blastn 16500 305 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
21474809 21474809 PRJNA358049_S_NODE_17257_length_165_cov_1.241379_g17209_i0 PRJNA358049 17257 165 1.241379 2.04827535 Gammaretrovirus 153135 Viruses Viruses 305 9.59e-79   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g17209 i0 100 65.1151515151515 165 0 100 0 1 165 4079 3915 Moloney murine leukemia virus, complete genome blastn 10744 305 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;