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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA358049" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA358049 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5502443 5502443 PRJNA358049_S_NODE_8445_length_217_cov_1.589286_g8397_i0 PRJNA358049 8445 217 1.589286 3.44875062 Cercozoa sp. YPF501 552662 SAR_Eukaryotes SAR_Eukaryotes 226 1.07e-54   NTclustered gi|220983376|dbj|AB453012.1| 552662 g8397 i0 86.239 56.6820276497696 218 19 96 8 3 210 2730 2946 Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 12300 226 1 Eukaryota Sar   Cercozoa         Cercozoa sp. YPF501
11276382 11276382 PRJNA358049_S_NODE_3589_length_314_cov_10.343396_g3541_i0 PRJNA358049 3589 314 10.343396 32.47826344 Navicula 50949 SAR_Eukaryotes SAR_Eukaryotes 553 6.609999999999998e-153   NTclustered gi|18698478|gb|AF417679.1| 186032 g3541 i0 98.408 99.7898089171974 314 5 100 0 1 314 351 38 Navicula cf. erifuga strain Navicula large subunit ribosomal RNA gene, partial sequence blastn 31334 558 0.991039426523297 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula cf. erifuga
15100914 15100914 PRJNA358049_S_NODE_18772_length_161_cov_2.535714_g18724_i0 PRJNA358049 18772 161 2.535714 4.08249954 Fragilaria 33644 SAR_Eukaryotes SAR_Eukaryotes 261 2.04e-65   NTclustered gi|18698483|gb|AF417684.1| 185980 g18724 i0 98 93.9192546583851 150 3 93 0 10 159 137 286 Fragilaria capucina strain M1767 large subunit ribosomal RNA gene, partial sequence blastn 15121 261 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria capucina
16375591 16375591 PRJNA358049_S_NODE_14273_length_177_cov_1.898438_g14225_i0 PRJNA358049 14273 177 1.898438 3.36023526 Pseudovorticella 310678 SAR_Eukaryotes SAR_Eukaryotes 296 6.26e-76   NTclustered gi|2217167748|gb|ON157273.1| 1892842 g14225 i0 98.225 95.3898305084746 169 3 95 0 1 169 339 171 Pseudovorticella sp. isolate DP127 small subunit ribosomal RNA gene, partial sequence blastn 16884 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Pseudovorticella Pseudovorticella sp.
18250263 18250263 PRJNA358049_S_NODE_17955_length_163_cov_1.807018_g17907_i0 PRJNA358049 17955 163 1.807018 2.94543934 Encyonema minutum 431330 SAR_Eukaryotes SAR_Eukaryotes 243 7.51e-60   NTclustered gi|168145881|emb|AM710515.1| 431330 g17907 i0 97.857 69.4662576687117 140 3 86 0 15 154 474 335 Encyonema minutum partial 28S rRNA gene, strain AT-137.13 blastn 11323 243 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
18924590 18924590 PRJNA358049_S_NODE_19155_length_153_cov_2.201923_g19107_i0 PRJNA358049 19155 153 2.201923 3.36894219 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 244 1.93e-60   NTclustered gi|115353909|gb|DQ868349.1| 404948 g19107 i0 95.484 100.647058823529 155 4 100 2 1 153 1448 1601 Vorticella sp. JCC-2006-4 18S small subunit ribosomal RNA gene, partial sequence blastn 15399 244 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. JCC-2006-4
20800222 20800222 PRJNA358049_S_NODE_4917_length_273_cov_9.196429_g4869_i0 PRJNA358049 4917 273 9.196429 25.10625117 Encyonema minutum 431330 SAR_Eukaryotes SAR_Eukaryotes 496 9.63e-136   NTclustered gi|168145881|emb|AM710515.1| 431330 g4869 i0 99.631 99.7838827838828 271 1 99 0 3 273 27 297 Encyonema minutum partial 28S rRNA gene, strain AT-137.13 blastn 27241 496 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Cymbellales Cymbellaceae Encyonema Encyonema minutum
22075358 22075358 PRJNA358049_S_NODE_7498_length_228_cov_1.715084_g7450_i0 PRJNA358049 7498 228 1.715084 3.91039152 Pfiesteria-like sp. HR1SSeptA5 290075 SAR_Eukaryotes SAR_Eukaryotes 416 6.259999999999998e-112   NTclustered gi|51847969|gb|AY590483.1| 290075 g7450 i0 99.561 99.0964912280702 228 1 100 0 1 228 2700 2473 Pfiesteria-like sp. HR1SSeptA5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22594 416 1 Eukaryota Sar     Dinophyceae Peridiniales Pfiesteriaceae   Pfiesteria-like sp. HR1SSeptA5
24024866 24024866 PRJNA358049_S_NODE_14979_length_173_cov_2.435484_g14931_i0 PRJNA358049 14979 173 2.435484 4.21338732 Naviculaceae 67474 SAR_Eukaryotes SAR_Eukaryotes 281 1.7e-71   NTclustered gi|2301268953|ref|NC_066075.1| 355634 g14931 i0 100 173.28323699422 152 0 88 0 1 152 9969 9818 Navicula arenaria isolate Jiaozhou Bay in China chloroplast, complete genome blastn 29978 281 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula arenaria
24624964 24624964 PRJNA358049_S_NODE_5000_length_271_cov_14.076577_g4952_i0 PRJNA358049 5000 271 14.076577 38.14752367 Pseudovorticella sp. FG-2015 1607895 SAR_Eukaryotes SAR_Eukaryotes 460 3.4799999999999997e-125   NTclustered gi|759083559|gb|KM222176.1| 1607895 g4952 i0 98.106 95.5387453874539 264 5 97 0 1 264 169 432 Pseudovorticella sp. FG-2015 voucher SZ2010032108 large subunit ribosomal RNA gene, partial sequence blastn 25891 460 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Pseudovorticella Pseudovorticella sp. FG-2015

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;