contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA358009" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1073121 | 1073121 | PRJNA358009_P_NODE_9501_length_185_cov_8.029412_g9432_i0 | PRJNA358009 | 9501 | 185 | 8.029412 | 14.8544122 | Gracilinema | 2951106 | Bacteria | Bacteria | 228 | 2.4499999999999995e-55 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g9432 | i0 | 89.503 | 115.183783783784 | 181 | 18 | 97 | 1 | 4 | 183 | 389 | 209 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 21309 | 228 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 2348464 | 2348464 | PRJNA358009_P_NODE_9422_length_186_cov_2.751825_g9353_i0 | PRJNA358009 | 9422 | 186 | 2.751825 | 5.1183945 | Treponema | 157 | Bacteria | Bacteria | 291 | 3.1e-74 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g9353 | i0 | 94.709 | 172.360215053763 | 189 | 6 | 100 | 3 | 1 | 186 | 1687 | 1874 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 32059 | 291 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 2948937 | 2948937 | PRJNA358009_P_NODE_7123_length_277_cov_16.421053_g7056_i0 | PRJNA358009 | 7123 | 277 | 16.421053 | 45.48631681 | Treponema sp. | 166 | Bacteria | Bacteria | 141 | 5.29e-29 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g7056 | i0 | 80.526 | 128.353790613718 | 190 | 32 | 69 | 5 | 87 | 276 | 1476607 | 1476423 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 35554 | 141 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 4900919 | 4900919 | PRJNA358009_P_NODE_1964_length_330_cov_11.384342_g1901_i0 | PRJNA358009 | 1964 | 330 | 11.384342 | 37.5683286 | Treponema | 157 | Bacteria | Bacteria | 147 | 1.39e-30 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g1901 | i0 | 86.567 | 11.7121212121212 | 134 | 17 | 40 | 1 | 190 | 322 | 324741 | 324608 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 3865 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 8725628 | 8725628 | PRJNA358009_P_NODE_17107_length_157_cov_13.379630_g17038_i0 | PRJNA358009 | 17107 | 157 | 13.37963 | 21.0060191 | Gracilinema | 2951106 | Bacteria | Bacteria | 230 | 5.58e-56 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g17038 | i0 | 94.595 | 144.229299363057 | 148 | 8 | 94 | 0 | 2 | 149 | 2912 | 2765 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 22644 | 230 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 8725700 | 8725700 | PRJNA358009_P_NODE_5947_length_327_cov_1.589928_g5884_i0 | PRJNA358009 | 5947 | 327 | 1.589928 | 5.19906456 | Treponema | 157 | Bacteria | Bacteria | 172 | 2.26e-38 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g5884 | i0 | 100 | 79.4403669724771 | 93 | 0 | 59 | 0 | 228 | 320 | 1013963 | 1013871 | Treponema medium strain T19 chromosome, complete genome | blastn | 25977 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 10602090 | 10602090 | PRJNA358009_P_NODE_7029_length_291_cov_28.115702_g6962_i0 | PRJNA358009 | 7029 | 291 | 28.115702 | 81.81669282 | Breznakiella homolactica | 2798577 | Bacteria | Bacteria | 368 | 2.36e-97 | NTclustered | gi|2093987262|gb|CP067089.2| | 2798577 | g6962 | i0 | 91.45 | 163.584192439863 | 269 | 21 | 92 | 2 | 24 | 291 | 9298 | 9031 | Breznakiella homolactica strain RmG30 chromosome, complete genome | blastn | 47603 | 368 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Breznakiella | Breznakiella homolactica | ||
| 11877007 | 11877007 | PRJNA358009_P_NODE_7790_length_221_cov_6.005814_g7721_i0 | PRJNA358009 | 7790 | 221 | 6.005814 | 13.27284894 | Sphaerochaeta pleomorpha | 1131707 | Bacteria | Bacteria | 379 | 7.909999999999998e-101 | NTclustered | gi|359350094|gb|CP003155.1| | 158190 | g7721 | i0 | 98.598 | 241.366515837104 | 214 | 3 | 97 | 0 | 8 | 221 | 2305363 | 2305576 | Sphaerochaeta pleomorpha str. Grapes, complete genome | blastn | 53342 | 379 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta pleomorpha | ||
| 12551434 | 12551434 | PRJNA358009_P_NODE_1050_length_370_cov_19.040498_g989_i0 | PRJNA358009 | 1050 | 370 | 19.040498 | 70.4498426 | Gracilinema | 2951106 | Bacteria | Bacteria | 409 | 1.81e-109 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g989 | i0 | 87.088 | 200.210810810811 | 364 | 44 | 98 | 2 | 1 | 363 | 2504 | 2143 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 74078 | 409 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 12551448 | 12551448 | PRJNA358009_P_NODE_11410_length_174_cov_3.456000_g11341_i0 | PRJNA358009 | 11410 | 174 | 3.456 | 6.01344 | Gracilinema | 2951106 | Bacteria | Bacteria | 211 | 2.28e-50 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g11341 | i0 | 89.759 | 3.81609195402299 | 166 | 16 | 95 | 1 | 7 | 172 | 699 | 863 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 664 | 211 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;