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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA358009" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA358009 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2948938 2948938 PRJNA358009_P_NODE_7243_length_262_cov_5.492958_g7175_i0 PRJNA358009 7243 262 5.492958 14.39154996 Neobodo designis 312471 Euglenozoa other_Eukaryota 446 9.379999999999998e-121   NTclustered gi|197723537|gb|EF681922.2| 312471 g7175 i0 98.054 156.408396946565 257 4 98 1 4 260 1218 963 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 40979 446 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
5501952 5501952 PRJNA358009_P_NODE_6805_length_323_cov_10.645985_g6742_i0 PRJNA358009 6805 323 10.645985 34.38653155 Neobodo designis 312471 Euglenozoa other_Eukaryota 520 6.919999999999998e-143   NTclustered gi|77994645|gb|DQ207583.1| 312471 g6742 i0 95.692 102.092879256966 325 10 100 3 1 323 1402 1080 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 32976 520 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
5501969 5501969 PRJNA358009_P_NODE_8025_length_210_cov_8.385093_g7956_i0 PRJNA358009 8025 210 8.385093 17.6086953 Bodo celer 266813 Euglenozoa other_Eukaryota 305 1.28e-78   NTclustered gi|45739063|gb|AY490221.1| 266813 g7956 i0 92.925 100.814285714286 212 12 99 3 1 209 1045 834 Bodo celer 18S ribosomal RNA gene, partial sequence blastn 21171 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo celer
10601914 10601914 PRJNA358009_P_NODE_12629_length_168_cov_4.142857_g12560_i0 PRJNA358009 12629 168 4.142857 6.95999976 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 126 8.2e-25   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g12560 i0 92.222 12.6428571428571 90 6 53 1 74 162 981 892 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 2124 126 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
18924510 18924510 PRJNA358009_P_NODE_7035_length_291_cov_4.057851_g6968_i0 PRJNA358009 7035 291 4.057851 11.80834641 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 281 3.16e-71   NTclustered gi|2414483|emb|Y00055.1| 5656 g6968 i0 90.323 86.0378006872852 217 18 74 2 70 284 7051 6836 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 25037 281 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
22074841 22074841 PRJNA358009_P_NODE_2258_length_327_cov_5.737410_g2195_i0 PRJNA358009 2258 327 5.73741 18.7613307 Trypanosomatidae sp. 1737640 Euglenozoa other_Eukaryota 193 1.74e-44   NTclustered gi|2022380703|gb|MW874580.1| 1737640 g2195 i0 97.345 75.6177370030581 113 3 63 0 214 326 688 800 Trypanosomatidae sp. isolate DN404 large subunit ribosomal RNA gene, partial sequence blastn 24727 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae   Trypanosomatidae sp.
22074928 22074928 PRJNA358009_P_NODE_9398_length_186_cov_3.912409_g9329_i0 PRJNA358009 9398 186 3.912409 7.27708074 Neobodo designis 312471 Euglenozoa other_Eukaryota 289 1.11e-73   NTclustered gi|59891960|gb|AY753620.1| 312471 g9329 i0 96.067 95.6666666666667 178 6 96 1 3 180 1769 1593 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 17794 289 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;