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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA358009" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA358009 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1672813 1672813 PRJNA358009_P_NODE_11102_length_176_cov_2.228346_g11033_i0 PRJNA358009 11102 176 2.228346 3.92188896 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 145 2.38e-30   NTclustered gi|759083508|gb|KM222125.1| 1004043 g11033 i0 85.926 27.2556818181818 135 19 77 0 42 176 1076 1210 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 4797 145 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
1673005 1673005 PRJNA358009_P_NODE_4642_length_327_cov_2.046763_g4579_i0 PRJNA358009 4642 327 2.046763 6.69291501 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 183 1.0499999999999998e-41   NTclustered gi|859811083|gb|KM818001.1| 88167 g4579 i0 100 47.8899082568807 99 0 60 0 229 327 1735 1637 Poterioochromonas malhamensis strain SAG 933.1c 23S ribosomal RNA gene, partial sequence; plastid blastn 15660 183 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
2948767 2948767 PRJNA358009_P_NODE_12963_length_167_cov_1.584746_g12894_i0 PRJNA358009 12963 167 1.584746 2.64652582 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 104 3.81e-18   NTclustered gi|657012566|gb|KF302620.1| 2850 g12894 i0 86.458 0.574850299401198 96 11 56 2 71 164 20 115 Phaeodactylum tricornutum clone C821 hypothetical protein mRNA, complete cds blastn 96 104 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
2948854 2948854 PRJNA358009_P_NODE_16023_length_161_cov_5.133929_g15954_i0 PRJNA358009 16023 161 5.133929 8.26562569 uncultured stramenopile 152704 SAR_Eukaryotes SAR_Eukaryotes 270 3.389999999999999e-68   NTclustered gi|527890162|gb|KF188080.1| 152704 g15954 i0 98.684 94.472049689441 152 2 94 0 8 159 395 546 Uncultured stramenopile clone S5_11 18S ribosomal RNA gene, partial sequence blastn 15210 270 1 Eukaryota Sar             uncultured stramenopile
3623782 3623782 PRJNA358009_P_NODE_9803_length_183_cov_9.500000_g9734_i0 PRJNA358009 9803 183 9.5 17.385 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 289 1.0899999999999998e-73   NTclustered gi|505574793|gb|AY598663.2| 126846 g9734 i0 97.076 93.4426229508197 171 5 93 0 10 180 123 293 Phytopythium ostracodes strain CBS 768.73 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17100 289 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Phytopythium Phytopythium ostracodes
4225354 4225354 PRJNA358009_P_NODE_10864_length_177_cov_3.726562_g10795_i0 PRJNA358009 10864 177 3.726562 6.59601474 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 302 1.34e-77   NTclustered gi|33520224|gb|AY273969.1| 123356 g10795 i0 98.817 95.9265536723164 169 2 95 0 4 172 72 240 Hyaloperonospora parasitica large subunit ribosomal RNA gene, partial sequence blastn 16979 302 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
4900950 4900950 PRJNA358009_P_NODE_4124_length_327_cov_2.258993_g4061_i0 PRJNA358009 4124 327 2.258993 7.38690711 Cercozoa 136419 SAR_Eukaryotes SAR_Eukaryotes 172 2.26e-38   NTclustered gi|1695781|gb|U42449.1|CAU42449 45111 g4061 i0 98.958 51.3853211009174 96 1 60 0 5 100 914 1009 Cercomonas ATCC50317 18S ribosomal RNA gene, complete sequence blastn 16803 172 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50317
4900985 4900985 PRJNA358009_P_NODE_6664_length_326_cov_2.151625_g6601_i0 PRJNA358009 6664 326 2.151625 7.0142975 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 167 1.05e-36   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g6601 i0 98.925 8.79141104294479 93 1 55 0 8 100 2240 2148 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 2866 167 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
5501747 5501747 PRJNA358009_P_NODE_10305_length_180_cov_6.549618_g10236_i0 PRJNA358009 10305 180 6.549618 11.7893124 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 307 2.9500000000000003e-79   NTclustered gi|238617602|gb|FJ973377.1| 188950 g10236 i0 98.837 22.8666666666667 172 2 96 0 6 177 1909 2080 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 4116 307 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5501907 5501907 PRJNA358009_P_NODE_2845_length_327_cov_3.183453_g2782_i0 PRJNA358009 2845 327 3.183453 10.40989131 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 62.1 5.11e-5   NTclustered gi|1819718724|gb|MN956530.1| 2850 g2782 i0 94.872 0.238532110091743 39 2 12 0 41 79 3575 3537 Phaeodactylum tricornutum strain ICE-H mitochondrion, complete genome blastn 78 62.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
5501954 5501954 PRJNA358009_P_NODE_7025_length_292_cov_5.967078_g6958_i0 PRJNA358009 7025 292 5.967078 17.42386776 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 182 3.31e-41   NTclustered gi|2727570083|gb|PP760457.1| 568390 g6958 i0 84.021 3.32191780821918 194 26 65 4 88 277 2284 2476 Leukarachnion sp. ATCC PRA-24 culture ATCC:BJ-24B2 mitochondrion, complete genome blastn 970 182 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
8725619 8725619 PRJNA358009_P_NODE_16567_length_160_cov_5.333333_g16498_i0 PRJNA358009 16567 160 5.333333 8.5333328 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 267 4.35e-67   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g16498 i0 98.675 87.1875 151 1 94 1 4 153 1014 864 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13950 267 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
9326238 9326238 PRJNA358009_P_NODE_12488_length_169_cov_2.516667_g12419_i0 PRJNA358009 12488 169 2.516667 4.25316723 Chlorellidium tetrabotrys 243652 SAR_Eukaryotes SAR_Eukaryotes 261 2.15e-65   NTclustered gi|223029651|gb|FJ030881.1| 243652 g12419 i0 95.679 8.28402366863905 162 7 96 0 4 165 1662 1823 Chlorellidium tetrabotrys strain SAG811-1 28S ribosomal RNA gene, partial sequence blastn 1400 261 1 Eukaryota Sar     Xanthophyceae Mischococcales Botryochloridaceae Chlorellidium Chlorellidium tetrabotrys
10001202 10001202 PRJNA358009_P_NODE_48_length_1015_cov_9.824017_g27_i0 PRJNA358009 48 1015 9.824017 99.71377255 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 664 0   NTclustered gi|323690576|gb|GU935635.1| 88167 g27 i0 100 75.1379310344828 359 0 58 0 304 662 1732 1374 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 76265 664 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
10001203 10001203 PRJNA358009_P_NODE_4928_length_327_cov_1.931655_g4865_i0 PRJNA358009 4928 327 1.931655 6.31651185 root 1 Root_unresolved Root_unresolved 180 1.35e-40   NTclustered gi|166044489|emb|CU367398.1| 100861 g4865 i0 99 31.9266055045872 100 1 44 0 1 100 237 138 Aphanomyces euteiches cDNA blastn 10440 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
10602117 10602117 PRJNA358009_P_NODE_929_length_387_cov_3.127219_g870_i0 PRJNA358009 929 387 3.127219 12.10233753 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 86.1 3.64e-12   NTclustered gi|820695469|tpe|LN714488.1| 572307 g870 i0 87.671 2.14728682170543 73 9 33 0 35 107 299781 299853 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 831 86.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
13151881 13151881 PRJNA358009_P_NODE_13431_length_166_cov_2.145299_g13362_i0 PRJNA358009 13431 166 2.145299 3.56119634 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 226 7.739999999999998e-55   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g13362 i0 92.994 25.078313253012 157 8 95 2 8 164 372 219 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 4163 226 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
13826408 13826408 PRJNA358009_P_NODE_4071_length_327_cov_2.284173_g4008_i0 PRJNA358009 4071 327 2.284173 7.46924571 Monodopsidaceae 425072 SAR_Eukaryotes SAR_Eukaryotes 167 1.05e-36   NTclustered gi|2632235299|gb|OR922681.1| 43926 g4008 i0 97 6.60244648318043 100 2 59 1 1 100 2889 2791 Nannochloropsis granulata strain AGSB0037 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2159 167 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis granulata
15100783 15100783 PRJNA358009_P_NODE_2752_length_327_cov_3.294964_g2689_i0 PRJNA358009 2752 327 3.294964 10.77453228 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 224 6.16e-54   NTclustered gi|407079770|gb|JQ281513.1| 2989 g2689 i0 98.438 39.7675840978593 128 1 39 1 1 127 2622 2495 Mallomonas papillosa strain CCMP476 28S ribosomal RNA gene, partial sequence blastn 13004 224 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas papillosa
15100836 15100836 PRJNA358009_P_NODE_7312_length_255_cov_10.679612_g7244_i0 PRJNA358009 7312 255 10.679612 27.2330106 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 466 6.98e-127   NTclustered gi|1409222725|gb|MH536659.1| 88167 g7244 i0 99.608 100.843137254902 255 1 100 0 1 255 1617 1363 Poterioochromonas malhamensis strain SAG933-1d small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 25715 466 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
15701021 15701021 PRJNA358009_P_NODE_8753_length_190_cov_3.248227_g8684_i0 PRJNA358009 8753 190 3.248227 6.1716313 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 335 1.4499999999999993e-87   NTclustered gi|323690576|gb|GU935635.1| 88167 g8684 i0 100 19.1 181 0 95 0 8 188 1833 2013 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 3629 335 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
16375471 16375471 PRJNA358009_P_NODE_2033_length_329_cov_3.989286_g1970_i0 PRJNA358009 2033 329 3.989286 13.12475094 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 215 3.73e-51   NTclustered gi|1409949881|gb|MH542675.1| 88167 g1970 i0 99.16 54.7021276595745 119 1 64 0 1 119 198 80 Poterioochromonas malhamensis strain SAG933-9 small subunit ribosomal RNA gene, partial sequence blastn 17997 215 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
16375474 16375474 PRJNA358009_P_NODE_2213_length_327_cov_31.438849_g2150_i0 PRJNA358009 2213 327 31.438849 102.80503623 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 298 3.58e-76   NTclustered gi|291495599|gb|GU823226.1| 152704 g2150 i0 100 75.0091743119266 161 0 76 0 1 161 1049 889 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 24528 298 1 Eukaryota Sar             uncultured stramenopile
17650571 17650571 PRJNA358009_P_NODE_17574_length_155_cov_6.433962_g17505_i0 PRJNA358009 17574 155 6.433962 9.9726411 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 263 5.41e-66   NTclustered gi|1802599795|gb|MT001204.1| 41631 g17505 i0 98.658 95.6903225806452 149 0 95 2 9 155 336 484 Colpoda sp. strain HFCC836 small subunit ribosomal RNA gene, partial sequence blastn 14832 263 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
17650575 17650575 PRJNA358009_P_NODE_17754_length_154_cov_45.219048_g17685_i0 PRJNA358009 17754 154 45.219048 69.63733392 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 259 6.94e-65   NTclustered gi|1409222725|gb|MH536659.1| 88167 g17685 i0 98.639 94.961038961039 147 1 95 1 1 147 2219 2074 Poterioochromonas malhamensis strain SAG933-1d small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 14624 259 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
18249795 18249795 PRJNA358009_P_NODE_12695_length_168_cov_2.537815_g12626_i0 PRJNA358009 12695 168 2.537815 4.2635292 Pfiesteria piscicida 71001 SAR_Eukaryotes SAR_Eukaryotes 222 1.02e-53   NTclustered gi|255965339|gb|FJ599922.1| 71001 g12626 i0 93.919 1.70833333333333 148 8 88 1 18 165 73 219 Pfiesteria piscicida clone Ppi+Rhod_cDNA51 senescence-associated protein-like mRNA, partial cds blastn 287 222 1 Eukaryota Sar     Dinophyceae Peridiniales Pfiesteriaceae Pfiesteria Pfiesteria piscicida
18924479 18924479 PRJNA358009_P_NODE_4455_length_327_cov_2.129496_g4392_i0 PRJNA358009 4455 327 2.129496 6.96345192 root 1 Root_unresolved Root_unresolved 174 6.29e-39   NTclustered gi|166046470|emb|CU367587.1| 100861 g4392 i0 98.98 39.9755351681957 98 0 58 1 228 324 617 714 Aphanomyces euteiches cDNA blastn 13072 174 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22074795 22074795 PRJNA358009_P_NODE_15958_length_161_cov_13.794643_g15889_i0 PRJNA358009 15958 161 13.794643 22.20937523 Picophagus flagellatus 106529 SAR_Eukaryotes SAR_Eukaryotes 100 4.71e-17   NTclustered gi|1910759526|gb|MW045538.1| 106529 g15889 i0 90 14.0683229813665 80 5 48 1 82 158 3353 3432 Picophagus flagellatus strain RCC22 large subunit ribosomal RNA gene, partial sequence blastn 2265 100 1 Eukaryota Sar         Picophagaceae Picophagus Picophagus flagellatus
23350344 23350344 PRJNA358009_P_NODE_8419_length_197_cov_6.317568_g8350_i0 PRJNA358009 8419 197 6.317568 12.44560896 Pythium monospermum 92964 SAR_Eukaryotes SAR_Eukaryotes 333 5.44e-87   NTclustered gi|33520250|gb|AY273995.1| 92964 g8350 i0 98.421 91.3350253807107 190 2 96 1 7 196 28 216 Pythium monospermum large subunit ribosomal RNA gene, partial sequence blastn 17993 333 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium monospermum
24024805 24024805 PRJNA358009_P_NODE_7199_length_267_cov_39.137615_g7132_i0 PRJNA358009 7199 267 39.137615 104.49743205 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 298 2.84e-76   NTclustered gi|291495599|gb|GU823226.1| 152704 g7132 i0 100 60.2996254681648 161 0 60 0 107 267 889 1049 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 16100 298 1 Eukaryota Sar             uncultured stramenopile
24624331 24624331 PRJNA358009_P_NODE_10480_length_179_cov_5.292308_g10411_i0 PRJNA358009 10480 179 5.292308 9.47323132 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 315 1.75e-81   NTclustered gi|2651357791|gb|PP174306.1| 41631 g10411 i0 100 26.8324022346369 170 0 95 0 4 173 3431 3262 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4803 315 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
25299263 25299263 PRJNA358009_P_NODE_7560_length_234_cov_7.194595_g7492_i0 PRJNA358009 7560 234 7.194595 16.8353523 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 433 6.41e-117   NTclustered gi|363498776|gb|JN662487.1| 120398 g7492 i0 100 93.4188034188034 234 0 100 0 1 234 609 376 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21860 433 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
25299276 25299276 PRJNA358009_P_NODE_80_length_890_cov_10.227111_g27_i1 PRJNA358009 80 890 10.227111 91.0212879 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 1072 0   NTclustered gi|323690576|gb|GU935635.1| 88167 g27 i1 100 83.9033707865169 580 0 65 0 8 587 1153 1732 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 74674 1072 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;