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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA358009" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 27 ✖

bioproject 1

  • PRJNA358009 · 27 ✖

analysis 1

  • blastn · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1672921 1672921 PRJNA358009_P_NODE_16042_length_161_cov_4.428571_g15973_i0 PRJNA358009 16042 161 4.428571 7.12999931 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 287 3.37e-73   NTclustered gi|11466174|ref|NC_002573.1| 5762 g15973 i0 98.758 105.018633540373 161 2 100 0 1 161 2413 2573 Naegleria gruberi mitochondrion, complete genome blastn 16908 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2948938 2948938 PRJNA358009_P_NODE_7243_length_262_cov_5.492958_g7175_i0 PRJNA358009 7243 262 5.492958 14.39154996 Neobodo designis 312471 Euglenozoa other_Eukaryota 446 9.379999999999998e-121   NTclustered gi|197723537|gb|EF681922.2| 312471 g7175 i0 98.054 156.408396946565 257 4 98 1 4 260 1218 963 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 40979 446 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
3623619 3623619 PRJNA358009_P_NODE_1343_length_347_cov_8.802013_g1282_i0 PRJNA358009 1343 347 8.802013 30.54298511 Naegleria 5761 Heterolobosea other_Eukaryota 449 9.97e-122   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1282 i0 99.593 8.64841498559078 246 1 99 0 1 246 5496 5741 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3001 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4901024 4901024 PRJNA358009_P_NODE_8344_length_199_cov_53.866667_g8275_i0 PRJNA358009 8344 199 53.866667 107.19466733 Naegleria 5761 Heterolobosea other_Eukaryota 350 5.47e-92   NTclustered gi|2618963742|gb|OR769034.1| 5762 g8275 i0 99.479 34.8140703517588 192 1 96 0 1 192 3445 3254 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6928 350 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5501946 5501946 PRJNA358009_P_NODE_625_length_448_cov_7.639098_g569_i0 PRJNA358009 625 448 7.639098 34.22315904 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 721 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g569 i0 95.749 36.9933035714286 447 19 99 0 2 448 1908 2354 Naegleria gruberi mitochondrion, complete genome blastn 16573 721 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5501952 5501952 PRJNA358009_P_NODE_6805_length_323_cov_10.645985_g6742_i0 PRJNA358009 6805 323 10.645985 34.38653155 Neobodo designis 312471 Euglenozoa other_Eukaryota 520 6.919999999999998e-143   NTclustered gi|77994645|gb|DQ207583.1| 312471 g6742 i0 95.692 102.092879256966 325 10 100 3 1 323 1402 1080 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 32976 520 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
5501969 5501969 PRJNA358009_P_NODE_8025_length_210_cov_8.385093_g7956_i0 PRJNA358009 8025 210 8.385093 17.6086953 Bodo celer 266813 Euglenozoa other_Eukaryota 305 1.28e-78   NTclustered gi|45739063|gb|AY490221.1| 266813 g7956 i0 92.925 100.814285714286 212 12 99 3 1 209 1045 834 Bodo celer 18S ribosomal RNA gene, partial sequence blastn 21171 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo celer
10601914 10601914 PRJNA358009_P_NODE_12629_length_168_cov_4.142857_g12560_i0 PRJNA358009 12629 168 4.142857 6.95999976 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 126 8.2e-25   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g12560 i0 92.222 12.6428571428571 90 6 53 1 74 162 981 892 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 2124 126 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
11276311 11276311 PRJNA358009_P_NODE_7449_length_242_cov_10.186528_g7381_i0 PRJNA358009 7449 242 10.186528 24.65139776 Naegleria 5761 Heterolobosea other_Eukaryota 433 6.66e-117   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g7381 i0 99.578 59.1198347107438 237 1 98 0 1 237 5054 4818 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 14307 433 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
12551444 12551444 PRJNA358009_P_NODE_1090_length_365_cov_27.775316_g1029_i0 PRJNA358009 1090 365 27.775316 101.3799034 Naegleria 5761 Heterolobosea other_Eukaryota 411 4.9599999999999996e-110   NTclustered gi|2289385106|gb|OP297026.1| 5762 g1029 i0 100 99.213698630137 222 0 98 0 45 266 601 380 Naegleria gruberi strain 3HKMJS1 small subunit ribosomal RNA gene, partial sequence blastn 36213 411 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13152040 13152040 PRJNA358009_P_NODE_7331_length_252_cov_28.610837_g7263_i0 PRJNA358009 7331 252 28.610837 72.09930924 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 383 7.13e-102   NTclustered gi|11466174|ref|NC_002573.1| 5762 g7263 i0 94.378 9.32142857142857 249 14 99 0 2 250 1207 1455 Naegleria gruberi mitochondrion, complete genome blastn 2349 383 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13152069 13152069 PRJNA358009_P_NODE_991_length_378_cov_4.306991_g930_i0 PRJNA358009 991 378 4.306991 16.28042598 Naegleria clarki 36333 Heterolobosea other_Eukaryota 688 0   NTclustered gi|2651357780|gb|PP174296.1| 36333 g930 i0 99.733 36.2248677248677 375 1 99 0 1 375 3724 4098 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13693 688 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
15100736 15100736 PRJNA358009_P_NODE_1352_length_347_cov_3.728188_g1291_i0 PRJNA358009 1352 347 3.728188 12.93681236 Naegleria 5761 Heterolobosea other_Eukaryota 305 2.28e-78   NTclustered gi|38606345|gb|AY376153.1| 5762 g1291 i0 98.286 25.1383285302594 175 2 92 1 1 174 1335 1161 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 8723 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16375440 16375440 PRJNA358009_P_NODE_15953_length_161_cov_76.598214_g15884_i0 PRJNA358009 15953 161 76.598214 123.32312454 Naegleria 5761 Heterolobosea other_Eukaryota 283 4.3599999999999995e-72   NTclustered gi|2618963742|gb|OR769034.1| 5762 g15884 i0 99.359 14.1739130434783 156 1 97 0 1 156 3429 3584 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2282 283 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18924510 18924510 PRJNA358009_P_NODE_7035_length_291_cov_4.057851_g6968_i0 PRJNA358009 7035 291 4.057851 11.80834641 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 281 3.16e-71   NTclustered gi|2414483|emb|Y00055.1| 5656 g6968 i0 90.323 86.0378006872852 217 18 74 2 70 284 7051 6836 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 25037 281 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
20799647 20799647 PRJNA358009_P_NODE_12557_length_168_cov_10.403361_g12488_i0 PRJNA358009 12557 168 10.403361 17.47764648 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 311 2.11e-80   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g12488 i0 100 20.452380952381 168 0 100 0 1 168 2415 2582 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 3436 311 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
21474707 21474707 PRJNA358009_P_NODE_537_length_476_cov_6.290398_g484_i0 PRJNA358009 537 476 6.290398 29.94229448 Naegleria 5761 Heterolobosea other_Eukaryota 239 3.31e-58   NTclustered gi|38606345|gb|AY376153.1| 5762 g484 i0 95.946 32.5168067226891 148 5 84 1 111 257 696 843 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 15478 239 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22074841 22074841 PRJNA358009_P_NODE_2258_length_327_cov_5.737410_g2195_i0 PRJNA358009 2258 327 5.73741 18.7613307 Trypanosomatidae sp. 1737640 Euglenozoa other_Eukaryota 193 1.74e-44   NTclustered gi|2022380703|gb|MW874580.1| 1737640 g2195 i0 97.345 75.6177370030581 113 3 63 0 214 326 688 800 Trypanosomatidae sp. isolate DN404 large subunit ribosomal RNA gene, partial sequence blastn 24727 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae   Trypanosomatidae sp.
22074928 22074928 PRJNA358009_P_NODE_9398_length_186_cov_3.912409_g9329_i0 PRJNA358009 9398 186 3.912409 7.27708074 Neobodo designis 312471 Euglenozoa other_Eukaryota 289 1.11e-73   NTclustered gi|59891960|gb|AY753620.1| 312471 g9329 i0 96.067 95.6666666666667 178 6 96 1 3 180 1769 1593 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 17794 289 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
22749858 22749858 PRJNA358009_P_NODE_438_length_517_cov_18.023504_g393_i0 PRJNA358009 438 517 18.023504 93.18151568 Naegleria 5761 Heterolobosea other_Eukaryota 736 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g393 i0 98.558 18.3133462282398 416 6 80 0 98 513 3632 4047 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 9468 736 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23350297 23350297 PRJNA358009_P_NODE_439_length_517_cov_17.923077_g394_i0 PRJNA358009 439 517 17.923077 92.66230809 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 880 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g394 i0 97.476 96.1953578336557 515 13 99 0 3 517 1053 539 Naegleria gruberi mitochondrion, complete genome blastn 49733 880 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23350334 23350334 PRJNA358009_P_NODE_7719_length_225_cov_9.170455_g7650_i0 PRJNA358009 7719 225 9.170455 20.63352375 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 315 2.31e-81   NTclustered gi|11466174|ref|NC_002573.1| 5762 g7650 i0 92.694 0.973333333333333 219 15 97 1 1 218 538 320 Naegleria gruberi mitochondrion, complete genome blastn 219 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24024824 24024824 PRJNA358009_P_NODE_859_length_399_cov_21.425714_g801_i0 PRJNA358009 859 399 21.425714 85.48859886 Naegleria 5761 Heterolobosea other_Eukaryota 725 0   NTclustered gi|13398503|gb|AF338421.1| 51634 g801 i0 100 91.0300751879699 392 0 98 0 1 392 993 602 Naegleria australiensis 18S ribosomal RNA gene, partial sequence blastn 36321 725 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
24624350 24624350 PRJNA358009_P_NODE_11900_length_171_cov_14.475410_g11831_i0 PRJNA358009 11900 171 14.47541 24.7529511 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 206 1.04e-48   NTclustered gi|11466174|ref|NC_002573.1| 5762 g11831 i0 90.506 59.8011695906433 158 12 91 3 3 158 1718 1562 Naegleria gruberi mitochondrion, complete genome blastn 10226 206 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25299168 25299168 PRJNA358009_P_NODE_17540_length_155_cov_29.424528_g17471_i0 PRJNA358009 17540 155 29.424528 45.6080184 Naegleria 5761 Heterolobosea other_Eukaryota 226 7.1e-55   NTclustered gi|38606345|gb|AY376153.1| 5762 g17471 i0 95.105 34.5225806451613 143 7 92 0 6 148 572 430 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 5351 226 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25299193 25299193 PRJNA358009_P_NODE_2220_length_327_cov_10.010791_g2157_i0 PRJNA358009 2220 327 10.010791 32.73528657 Naegleria 5761 Heterolobosea other_Eukaryota 595 1.1299999999999995e-165   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2157 i0 100 93.085626911315 322 0 98 0 1 322 430 109 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30439 595 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25299259 25299259 PRJNA358009_P_NODE_7200_length_267_cov_10.105505_g7133_i0 PRJNA358009 7200 267 10.105505 26.98169835 Naegleria 5761 Heterolobosea other_Eukaryota 449 7.410000000000001e-122   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7133 i0 99.593 11.0561797752809 246 1 92 0 1 246 4286 4041 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2952 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;