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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA358009" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA358009 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9326459 9326459 PRJNA358009_P_NODE_8008_length_211_cov_5.876543_g7939_i0 PRJNA358009 8008 211 5.876543 12.39950573 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 255 1.32e-63   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g7939 i0 89.216 102.57345971564 204 22 97 0 2 205 890860 890657 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 21643 255 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
10001168 10001168 PRJNA358009_P_NODE_1948_length_331_cov_2.808511_g1885_i0 PRJNA358009 1948 331 2.808511 9.29617141 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 209 1.75e-49   NTclustered gi|1842065531|gb|CP040002.1| 713059 g1885 i0 99.138 39.6465256797583 116 1 65 0 1 116 151304 151189 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 13123 209 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
10602099 10602099 PRJNA358009_P_NODE_7709_length_226_cov_3.480226_g7640_i0 PRJNA358009 7709 226 3.480226 7.86531076 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 346 8.24e-91   NTclustered gi|158515276|gb|EU056491.1| 179883 g7640 i0 98.469 86.7256637168142 196 3 87 0 8 203 455 650 Uncultured candidate division TM7 bacterium clone A07_001 16S ribosomal RNA gene, partial sequence blastn 19600 346 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
11276254 11276254 PRJNA358009_P_NODE_2089_length_328_cov_7.860215_g2026_i0 PRJNA358009 2089 328 7.860215 25.7815052 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 531 3.25e-146   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g2026 i0 97.428 118.326219512195 311 8 95 0 1 311 81852 82162 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 38811 531 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
12551590 12551590 PRJNA358009_P_NODE_7290_length_257_cov_3.831731_g7222_i0 PRJNA358009 7290 257 3.831731 9.84754867 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 462 9.109999999999999e-126   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g7222 i0 100 108.918287937743 250 0 97 0 6 255 80236 80485 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 27992 462 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
13151978 13151978 PRJNA358009_P_NODE_17771_length_154_cov_9.419048_g17702_i0 PRJNA358009 17771 154 9.419048 14.50533392 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 152 1.2099999999999999e-32   NTclustered gi|1950824677|gb|CP066698.1| 2053554 g17702 i0 87.879 2.13636363636364 132 12 83 3 22 149 655642 655511 MAG: Candidatus Falkowbacteria bacterium isolate NC_groundwater_1683_Pr3_B-0.1um_40_26 chromosome blastn 329 152 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
17650497 17650497 PRJNA358009_P_NODE_1154_length_359_cov_6.545161_g1093_i0 PRJNA358009 1154 359 6.545161 23.49712799 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 350 1.08e-91   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g1093 i0 98.974 91.116991643454 195 2 84 0 165 359 82046 81852 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 32711 350 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
24024672 24024672 PRJNA358009_P_NODE_12559_length_168_cov_10.050420_g12490_i0 PRJNA358009 12559 168 10.05042 16.8847056 Bacteria 2 Bacteria Bacteria 263 5.989999999999999e-66   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g12490 i0 96.25 8 160 6 95 0 8 167 1250149 1249990 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 1344 263 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;