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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA356682" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 21 ✖

bioproject 1

  • PRJNA356682 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
397690 397690 PRJNA356682_P_NODE_31781_length_264_cov_2.691099_g31090_i0 PRJNA356682 31781 264 2.691099 7.10450136 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 483 7.219999999999998e-132   NTclustered gi|985614202|gb|CP010834.1| 1609968 g31090 i0 99.621 149.625 264 1 100 0 1 264 496818 496555 Methanobrevibacter sp. YE315, complete genome blastn 39501 483 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
398029 398029 PRJNA356682_P_NODE_47341_length_209_cov_6.338235_g46650_i0 PRJNA356682 47341 209 6.338235 13.24691115 Methanosalsum zhilinae 39669 Archaea Archaea 56.5 0.001   NTclustered gi|335929340|gb|CP002101.1| 679901 g46650 i0 100 0.143540669856459 30 0 14 0 59 88 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
2947894 2947894 PRJNA356682_P_NODE_14523_length_371_cov_2.657718_g13833_i0 PRJNA356682 14523 371 2.657718 9.86013378 uncultured archaeon 115547 Archaea Archaea 680 0   NTclustered gi|166082200|gb|EF021729.1| 115547 g13833 i0 99.73 100.061994609164 371 1 100 0 1 371 518 148 Uncultured archaeon clone Elev_16S_arch_1021 16S ribosomal RNA gene, partial sequence blastn 37123 680 1 Archaea               uncultured archaeon
6775155 6775155 PRJNA356682_P_NODE_28706_length_276_cov_3.443350_g28015_i0 PRJNA356682 28706 276 3.44335 9.503646 uncultured crenarchaeote 29281 Archaea Archaea 455 1.66e-123   NTclustered gi|42557759|emb|AJ627422.1| 29281 g28015 i0 96.377 90.6992753623188 276 10 100 0 1 276 41481 41756 Uncultured crenarchaeote genomic fragment 54d9 blastn 25033 455 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
6775569 6775569 PRJNA356682_P_NODE_45046_length_241_cov_0.916667_g44355_i0 PRJNA356682 45046 241 0.916667 2.20916747 Haloferax gibbonsii 35746 Archaea Archaea 174 4.4399999999999997e-39   NTclustered gi|1919476744|gb|CP063205.1| 35746 g44355 i0 83.871 3.0746887966805 186 26 76 4 25 208 2789980 2789797 Haloferax gibbonsii strain LR2-5 chromosome, complete genome blastn 741 174 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax gibbonsii
10601677 10601677 PRJNA356682_P_NODE_44829_length_241_cov_0.916667_g44138_i0 PRJNA356682 44829 241 0.916667 2.20916747 Natronomonas halophila 2747817 Archaea Archaea 243 1.2e-59   NTclustered gi|1865516082|gb|CP058334.1| 2747817 g44138 i0 89.529 1.26970954356846 191 20 79 0 1 191 2869383 2869193 Natronomonas halophila strain C90 chromosome, complete genome blastn 306 243 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas halophila
12551048 12551048 PRJNA356682_P_NODE_45870_length_234_cov_2.142857_g45179_i0 PRJNA356682 45870 234 2.142857 5.01428538 Thermoproteati 1783275 Archaea Archaea 322 1.45e-83   NTclustered gi|42557759|emb|AJ627422.1| 29281 g45179 i0 91.453 22.6837606837607 234 20 100 0 1 234 41048 41281 Uncultured crenarchaeote genomic fragment 54d9 blastn 5308 322 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
12551084 12551084 PRJNA356682_P_NODE_5390_length_609_cov_2.509328_g4712_i0 PRJNA356682 5390 609 2.509328 15.28180752 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 1103 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g4712 i0 99.344 114.715927750411 610 3 100 1 1 609 849261 848652 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 69862 1112 0.991906474820144 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
15099906 15099906 PRJNA356682_P_NODE_14292_length_374_cov_2.378738_g13602_i0 PRJNA356682 14292 374 2.378738 8.89648012 Nitrososphaera 497726 Archaea Archaea 603 7.829999999999997e-168   NTclustered gi|300521484|gb|GU797787.1| 497727 g13602 i0 95.722 29.4224598930481 374 16 100 0 1 374 544 917 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 11004 603 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
16374989 16374989 PRJNA356682_P_NODE_45493_length_237_cov_2.646341_g44802_i0 PRJNA356682 45493 237 2.646341 6.27182817 Archaea 2157 Archaea Archaea 416 6.5499999999999985e-112   NTclustered gi|42557759|emb|AJ627422.1| 29281 g44802 i0 98.312 24.0126582278481 237 4 100 0 1 237 40916 41152 Uncultured crenarchaeote genomic fragment 54d9 blastn 5691 416 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16975139 16975139 PRJNA356682_P_NODE_36814_length_250_cov_0.870056_g36123_i0 PRJNA356682 36814 250 0.870056 2.17514 Methanobrevibacter ruminantium 83816 Archaea Archaea 381 2.5399999999999996e-101   NTclustered gi|288541968|gb|CP001719.1| 634498 g36123 i0 94.378 25.888 249 13 99 1 2 250 2040570 2040817 Methanobrevibacter ruminantium M1, complete genome blastn 6472 381 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
16975244 16975244 PRJNA356682_P_NODE_41114_length_245_cov_0.895349_g40423_i0 PRJNA356682 41114 245 0.895349 2.19360505 Candidatus Nitrosotenuis aquarius 1846278 Archaea Archaea 420 5.26e-113   NTclustered gi|1279207014|gb|CP024808.1| 1846278 g40423 i0 97.551 5.00816326530612 245 6 100 0 1 245 292019 291775 Candidatus Nitrosotenuis aquarius strain AQ6F chromosome, complete genome blastn 1227 420 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis aquarius
17649641 17649641 PRJNA356682_P_NODE_11974_length_406_cov_1.204204_g11284_i0 PRJNA356682 11974 406 1.204204 4.88906824 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 604 2.379999999999999e-168   NTclustered gi|388254672|gb|JQ768092.1| 115547 g11284 i0 93.58 99.3004926108374 405 26 99 0 2 406 29218 28814 Uncultured archaeon clone 02j05, complete sequence blastn 40316 610 0.99016393442623 Archaea               uncultured archaeon
18249523 18249523 PRJNA356682_P_NODE_43135_length_243_cov_0.905882_g42444_i0 PRJNA356682 43135 243 0.905882 2.20129326 Methanobrevibacter olleyae 294671 Archaea Archaea 327 3.25e-85   NTclustered gi|998157363|gb|CP014265.1| 294671 g42444 i0 91.25 7.32510288065844 240 21 99 0 1 240 302570 302809 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 1780 327 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
18249571 18249571 PRJNA356682_P_NODE_44635_length_241_cov_0.916667_g43944_i0 PRJNA356682 44635 241 0.916667 2.20916747 Natronomonas halophila 2747817 Archaea Archaea 368 1.9e-97   NTclustered gi|1865516082|gb|CP058334.1| 2747817 g43944 i0 94.191 1.54771784232365 241 14 100 0 1 241 156285 156045 Natronomonas halophila strain C90 chromosome, complete genome blastn 373 368 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas halophila
18923880 18923880 PRJNA356682_P_NODE_38855_length_248_cov_0.880000_g38164_i0 PRJNA356682 38855 248 0.88 2.1824 Halorubrum 56688 Archaea Archaea 298 2.61e-76   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g38164 i0 88.4 60.9516129032258 250 25 100 4 1 248 622039 622286 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 15116 298 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
22073909 22073909 PRJNA356682_P_NODE_19458_length_326_cov_4.774704_g18767_i0 PRJNA356682 19458 326 4.774704 15.56553504 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 597 3.139999999999999e-166   NTclustered gi|937513727|gb|CP012850.1| 1353260 g18767 i0 99.693 18.9662576687117 326 1 100 0 1 326 849574 849249 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 6183 597 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
22074561 22074561 PRJNA356682_P_NODE_4758_length_650_cov_4.975737_g4085_i0 PRJNA356682 4758 650 4.975737 32.3422905 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 1134 0   NTclustered gi|985614202|gb|CP010834.1| 1609968 g4085 i0 98.157 162.173846153846 651 11 100 1 1 650 495560 496210 Methanobrevibacter sp. YE315, complete genome blastn 105413 1134 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
24024294 24024294 PRJNA356682_P_NODE_6299_length_561_cov_2.225410_g5615_i0 PRJNA356682 6299 561 2.22541 12.4845501 Archaea 2157 Archaea Archaea 1026 0   NTclustered gi|330423158|gb|JF302494.1| 115547 g5615 i0 99.643 99.9928698752228 561 2 100 0 1 561 57 617 Uncultured archaeon clone AP8-138 16S ribosomal RNA gene, partial sequence blastn 56096 1031 0.995150339476237 Archaea               uncultured archaeon
24024314 24024314 PRJNA356682_P_NODE_7319_length_519_cov_2.500000_g6631_i0 PRJNA356682 7319 519 2.5 12.975 Archaea 2157 Archaea Archaea 931 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g6631 i0 99.037 94.6531791907514 519 5 100 0 1 519 41883 42401 Uncultured crenarchaeote genomic fragment 54d9 blastn 49125 931 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
24624021 24624021 PRJNA356682_P_NODE_40140_length_246_cov_0.890173_g39449_i0 PRJNA356682 40140 246 0.890173 2.18982558 Natronorubrum bangense 61858 Archaea Archaea 132 2.77e-26   NTclustered gi|1621081954|gb|CP031305.1| 61858 g39449 i0 87.179 1.90650406504065 117 13 47 2 67 182 309078 309193 Natronorubrum bangense strain JCM 10635 chromosome, complete genome blastn 469 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum bangense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;