contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA356682" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 398115 | 398115 | PRJNA356682_P_NODE_881_length_1701_cov_29.980958_g551_i1 | PRJNA356682 | 881 | 1701 | 29.980958 | 509.97609558 | Minicystis rosea | 888845 | Bacteria | Bacteria | 1749 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g551 | i1 | 85.398 | 150.321575543798 | 1719 | 214 | 99 | 33 | 5 | 1701 | 13715059 | 13716762 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 255697 | 1749 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 5500918 | 5500918 | PRJNA356682_P_NODE_16785_length_348_cov_7.374545_g16094_i0 | PRJNA356682 | 16785 | 348 | 7.374545 | 25.6634166 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 243 | 1.8200000000000002e-59 | NTclustered | gi|1950807334|gb|CP066680.1| | 2026735 | g16094 | i0 | 82.474 | 168.166666666667 | 291 | 37 | 81 | 12 | 19 | 301 | 309201 | 309485 | MAG: Deltaproteobacteria bacterium isolate NC_groundwater_69_Ag_B-0.1um_32_21 chromosome | blastn | 58522 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 5501430 | 5501430 | PRJNA356682_P_NODE_39705_length_247_cov_0.885057_g39014_i0 | PRJNA356682 | 39705 | 247 | 0.885057 | 2.18609079 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 215 | 2.69e-51 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g39014 | i0 | 84.404 | 4.44939271255061 | 218 | 34 | 88 | 0 | 20 | 237 | 12170455 | 12170672 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 1099 | 215 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 6174967 | 6174967 | PRJNA356682_P_NODE_1025_length_1561_cov_10.882392_g654_i0 | PRJNA356682 | 1025 | 1561 | 10.882392 | 169.87413912 | root | 1 | Root_unresolved | Root_unresolved | 2196 | 0 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g654 | i0 | 92.097 | 120.376040999359 | 1569 | 108 | 100 | 15 | 1 | 1561 | 18 | 1578 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 187907 | 2211 | 0.993215739484396 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 9325941 | 9325941 | PRJNA356682_P_NODE_41928_length_244_cov_0.900585_g41237_i0 | PRJNA356682 | 41928 | 244 | 0.900585 | 2.1974274 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 206 | 1.6e-48 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g41237 | i0 | 83.186 | 3.13114754098361 | 226 | 36 | 92 | 2 | 20 | 244 | 2839776 | 2839552 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 764 | 206 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 10000267 | 10000267 | PRJNA356682_P_NODE_15468_length_360_cov_11.773519_g14778_i0 | PRJNA356682 | 15468 | 360 | 11.773519 | 42.3846684 | Pendulispora | 3375062 | Bacteria | Bacteria | 516 | 1.01e-141 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g14778 | i0 | 92.5 | 160.461111111111 | 360 | 27 | 100 | 0 | 1 | 360 | 7287857 | 7287498 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 57766 | 516 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 10601167 | 10601167 | PRJNA356682_P_NODE_21649_length_311_cov_9.214286_g20958_i0 | PRJNA356682 | 21649 | 311 | 9.214286 | 28.65642946 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 346 | 1.19e-90 | NTclustered | gi|2579656172|gb|CP043491.1| | 43 | g20958 | i0 | 87.179 | 222.565916398714 | 312 | 30 | 99 | 7 | 1 | 309 | 7406626 | 7406322 | Cystobacter fuscus strain Cbf 10 chromosome, complete genome | blastn | 69218 | 346 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 11876593 | 11876593 | PRJNA356682_P_NODE_45030_length_241_cov_0.916667_g44339_i0 | PRJNA356682 | 45030 | 241 | 0.916667 | 2.20916747 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 429 | 8.58e-116 | NTclustered | gi|1957989826|gb|CP068048.1| | 34 | g44339 | i0 | 98.755 | 23.2738589211618 | 241 | 3 | 100 | 0 | 1 | 241 | 9231635 | 9231875 | Myxococcus xanthus strain R31 chromosome, complete genome | blastn | 5609 | 429 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 13151204 | 13151204 | PRJNA356682_P_NODE_2671_length_905_cov_9.137019_g2084_i0 | PRJNA356682 | 2671 | 905 | 9.137019 | 82.69002195 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 1151 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g2084 | i0 | 89.735 | 124.420994475138 | 906 | 86 | 99 | 6 | 1 | 904 | 7290002 | 7289102 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 112601 | 1151 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 15099905 | 15099905 | PRJNA356682_P_NODE_14192_length_375_cov_5.943709_g13502_i0 | PRJNA356682 | 14192 | 375 | 5.943709 | 22.28890875 | Sorangium | 39643 | Bacteria | Bacteria | 244 | 5.49e-60 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g13502 | i0 | 81.388 | 199.44 | 317 | 44 | 82 | 11 | 67 | 370 | 3689796 | 3690110 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 74790 | 244 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 15100404 | 15100404 | PRJNA356682_P_NODE_852_length_1747_cov_66.850657_g532_i0 | PRJNA356682 | 852 | 1747 | 66.850657 | 1167.88097779 | Pendulispora | 3375062 | Bacteria | Bacteria | 1978 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g532 | i0 | 87.217 | 174.301087578706 | 1768 | 189 | 99 | 32 | 1 | 1746 | 9854163 | 9852411 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 304504 | 1986 | 0.995971802618328 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 18249072 | 18249072 | PRJNA356682_P_NODE_23855_length_299_cov_1.730088_g23164_i0 | PRJNA356682 | 23855 | 299 | 1.730088 | 5.17296312 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 464 | 3.0099999999999996e-126 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g23164 | i0 | 94.667 | 61.695652173913 | 300 | 14 | 100 | 2 | 1 | 299 | 1312986 | 1312688 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 18447 | 464 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 18923845 | 18923845 | PRJNA356682_P_NODE_3555_length_761_cov_8.537791_g2917_i0 | PRJNA356682 | 3555 | 761 | 8.537791 | 64.97258951 | Myxococcaceae | 31 | Bacteria | Bacteria | 745 | 0 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g2917 | i0 | 85.195 | 218.220762155059 | 743 | 91 | 96 | 19 | 29 | 761 | 3676 | 4409 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 166066 | 745 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 20799558 | 20799558 | PRJNA356682_P_NODE_877_length_1708_cov_27.154128_g551_i0 | PRJNA356682 | 877 | 1708 | 27.154128 | 463.79250624 | Minicystis rosea | 888845 | Bacteria | Bacteria | 1834 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g551 | i0 | 86.195 | 151.080210772834 | 1724 | 205 | 99 | 29 | 5 | 1708 | 13715059 | 13716769 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 258045 | 1834 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 21474266 | 21474266 | PRJNA356682_P_NODE_8577_length_477_cov_22.242574_g7888_i0 | PRJNA356682 | 8577 | 477 | 22.242574 | 106.09707798 | Myxococcaceae | 31 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g7888 | i0 | 91.841 | 324.03144654088 | 478 | 33 | 100 | 4 | 1 | 477 | 379937 | 379465 | Myxococcus xanthus strain DK1050 chromosome | blastn | 154563 | 665 | 0.995488721804511 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 22074283 | 22074283 | PRJNA356682_P_NODE_35678_length_251_cov_1.842697_g34987_i0 | PRJNA356682 | 35678 | 251 | 1.842697 | 4.62516947 | Anaeromyxobacter sp. Fw109-5 | 404589 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|152026452|gb|CP000769.1| | 404589 | g34987 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 170 | 197 | 5163841 | 5163868 | Anaeromyxobacter sp. Fw109-5, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 22749434 | 22749434 | PRJNA356682_P_NODE_8198_length_488_cov_13.925301_g7509_i0 | PRJNA356682 | 8198 | 488 | 13.925301 | 67.95546888 | Stigmatella | 40 | Bacteria | Bacteria | 645 | 1.7199999999999994e-180 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g7509 | i0 | 90.871 | 275.768442622951 | 482 | 42 | 99 | 2 | 8 | 488 | 287 | 767 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 134575 | 645 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 24624070 | 24624070 | PRJNA356682_P_NODE_41920_length_244_cov_0.900585_g41229_i0 | PRJNA356682 | 41920 | 244 | 0.900585 | 2.1974274 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 124 | 4.599999999999999e-24 | NTclustered | gi|2108117163|gb|CP070734.1| | 2026735 | g41229 | i0 | 86.726 | 0.463114754098361 | 113 | 13 | 46 | 2 | 133 | 244 | 1378532 | 1378421 | MAG: Deltaproteobacteria bacterium isolate bin407 chromosome | blastn | 113 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;