RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA356682" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA356682 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10601192 10601192 PRJNA356682_P_NODE_22869_length_304_cov_3.653680_g22178_i0 PRJNA356682 22869 304 3.65368 11.1071872 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 364 3.1999999999999993e-96   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g22178 i0 88.926 222.342105263158 298 30 98 3 1 298 2682322 2682028 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 67592 364 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
14426388 14426388 PRJNA356682_P_NODE_30072_length_271_cov_1.555556_g29381_i0 PRJNA356682 30072 271 1.555556 4.21555676 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 327 3.69e-85   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g29381 i0 88.561 209.90405904059 271 30 99 1 2 271 2682326 2682596 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 56884 327 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
15700398 15700398 PRJNA356682_P_NODE_36353_length_251_cov_0.865169_g35662_i0 PRJNA356682 36353 251 0.865169 2.17157419 Tepidiforma flava 3004094 Bacteria Bacteria 300 7.36e-77   NTclustered gi|2421951025|gb|CP115149.1| 3004094 g35662 i0 91.324 6.25498007968127 219 19 87 0 28 246 788341 788123 Tepidiforma flava strain YIM 72310 chromosome, complete genome blastn 1570 300 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae Tepidiforma Tepidiforma flava
24623648 24623648 PRJNA356682_P_NODE_24180_length_297_cov_2.062500_g23489_i0 PRJNA356682 24180 297 2.0625 6.125625 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 243 1.53e-59   NTclustered gi|1915456248|dbj|AP024096.1| 2717365 g23489 i0 85.957 667.535353535354 235 24 78 8 39 270 792907 792679 Ktedonobacteria bacterium brp13 DNA, complete genome blastn 198258 243 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;