contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA356682" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 398024 | 398024 | PRJNA356682_P_NODE_46981_length_222_cov_6.281879_g46290_i0 | PRJNA356682 | 46981 | 222 | 6.281879 | 13.94577138 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 407 | 3.65e-109 | NTclustered | gi|1212783794|gb|MF083691.1| | 3055 | g46290 | i0 | 100 | 139.108108108108 | 220 | 0 | 99 | 0 | 1 | 220 | 40560 | 40779 | Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome | blastn | 30882 | 407 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 2347878 | 2347878 | PRJNA356682_P_NODE_47502_length_204_cov_26.916031_g46811_i0 | PRJNA356682 | 47502 | 204 | 26.916031 | 54.90870324 | Chlamydomonas | 3052 | Plants | Plants | 178 | 2.81e-40 | NTclustered | gi|2207975053|gb|OM985703.1| | 225041 | g46811 | i0 | 90.441 | 65.2647058823529 | 136 | 11 | 67 | 2 | 69 | 204 | 2126 | 1993 | Chlamydomonas chlamydogama strain SAG 11-48b small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 13314 | 178 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas chlamydogama | |
| 2947927 | 2947927 | PRJNA356682_P_NODE_16543_length_351_cov_1.334532_g15852_i0 | PRJNA356682 | 16543 | 351 | 1.334532 | 4.68420732 | Helicosporidium sp. ex Simulium jonesi | 145475 | Plants | Plants | 150 | 1.1399999999999999e-31 | NTclustered | gi|386800430|ref|NC_017841.1| | 145475 | g15852 | i0 | 76.596 | 6.30484330484331 | 282 | 60 | 79 | 6 | 43 | 321 | 33820 | 34098 | Helicosporidium sp. ex Simulium jonesi mitochondrion, complete genome | blastn | 2213 | 150 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Helicosporidium | Helicosporidium sp. ex Simulium jonesi | |
| 3623179 | 3623179 | PRJNA356682_P_NODE_46203_length_231_cov_2.512658_g45512_i0 | PRJNA356682 | 46203 | 231 | 2.512658 | 5.80423998 | Desmochloris | 138596 | Plants | Plants | 412 | 8.22e-111 | NTclustered | gi|57864438|dbj|AB049416.2| | 138176 | g45512 | i0 | 99.127 | 99.991341991342 | 229 | 2 | 99 | 0 | 1 | 229 | 852 | 624 | Desmochloris halophila gene for 18S rRNA | blastn | 23098 | 412 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Chlorocystidales | Chlorocystidaceae | Desmochloris | Desmochloris halophila | |
| 4224459 | 4224459 | PRJNA356682_P_NODE_13404_length_385_cov_1.480769_g12714_i0 | PRJNA356682 | 13404 | 385 | 1.480769 | 5.70096065 | Trebouxia sp. A1-2 | 2608996 | Plants | Plants | 91.6 | 7.79e-14 | NTclustered | gi|1825511251|gb|MN642622.1| | 2608996 | g12714 | i0 | 88.312 | 15.8857142857143 | 77 | 8 | 20 | 1 | 3 | 78 | 86205 | 86129 | Trebouxia sp. A1-2 mitochondrion, complete genome | blastn | 6116 | 91.6 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. A1-2 | |
| 4224813 | 4224813 | PRJNA356682_P_NODE_30684_length_268_cov_16.825641_g29993_i0 | PRJNA356682 | 30684 | 268 | 16.825641 | 45.09271788 | Desmodesmus abundans | 77547 | Plants | Plants | 327 | 3.64e-85 | NTclustered | gi|2312613210|ref|NC_066651.1| | 77547 | g29993 | i0 | 89.179 | 90.4888059701493 | 268 | 21 | 100 | 4 | 1 | 268 | 76936 | 77195 | Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome | blastn | 24251 | 327 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus abundans | |
| 5500916 | 5500916 | PRJNA356682_P_NODE_16625_length_350_cov_1.638989_g15934_i0 | PRJNA356682 | 16625 | 350 | 1.638989 | 5.7364615 | Hazenia capsulata | 2202518 | Plants | Plants | 220 | 8.559999999999999e-53 | NTclustered | gi|1197511155|ref|NC_034714.1| | 2202518 | g15934 | i0 | 83.682 | 74.5228571428571 | 239 | 33 | 68 | 6 | 5 | 241 | 79786 | 79552 | Hazenia capsulata chloroplast, complete genome | blastn | 26083 | 220 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Hazeniaceae | Hazenia | Hazenia capsulata | |
| 6774815 | 6774815 | PRJNA356682_P_NODE_12646_length_395_cov_147.040373_g11956_i0 | PRJNA356682 | 12646 | 395 | 147.040373 | 580.80947335 | Haematococcus lacustris | 44745 | Plants | Plants | 407 | 7e-109 | NTclustered | gi|1279575454|gb|MF683078.1| | 44745 | g11956 | i0 | 85.354 | 245.412658227848 | 396 | 55 | 99 | 3 | 1 | 393 | 3851 | 3456 | Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 96938 | 407 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 8050807 | 8050807 | PRJNA356682_P_NODE_2787_length_884_cov_33.842170_g2191_i0 | PRJNA356682 | 2787 | 884 | 33.84217 | 299.1647828 | Haematococcus lacustris | 44745 | Plants | Plants | 749 | 0 | NTclustered | gi|1279575454|gb|MF683078.1| | 44745 | g2191 | i0 | 82.333 | 288.178733031674 | 900 | 123 | 99 | 28 | 1 | 883 | 3810 | 2930 | Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 254750 | 749 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 8724693 | 8724693 | PRJNA356682_P_NODE_14787_length_368_cov_2.640678_g14097_i0 | PRJNA356682 | 14787 | 368 | 2.640678 | 9.71769504 | Scenedesmaceae | 3086 | Plants | Plants | 619 | 7.64e-173 | NTclustered | gi|2386955046|ref|NC_068582.1| | 55409 | g14097 | i0 | 97.011 | 107.864130434783 | 368 | 11 | 100 | 0 | 1 | 368 | 91169 | 90802 | Coelastrum microporum chloroplast, complete genome | blastn | 39694 | 625 | 0.9904 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Coelastrum | Coelastrum microporum | |
| 8725148 | 8725148 | PRJNA356682_P_NODE_46867_length_226_cov_2.013072_g46176_i0 | PRJNA356682 | 46867 | 226 | 2.013072 | 4.54954272 | root | 1 | Root_unresolved | Root_unresolved | 412 | 8.01e-111 | NTclustered | gi|1212783794|gb|MF083691.1| | 3055 | g46176 | i0 | 99.558 | 120.411504424779 | 226 | 1 | 100 | 0 | 1 | 226 | 36659 | 36884 | Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome | blastn | 27213 | 412 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 10000442 | 10000442 | PRJNA356682_P_NODE_25808_length_289_cov_1.824074_g25117_i0 | PRJNA356682 | 25808 | 289 | 1.824074 | 5.27157386 | Trebouxia | 13786 | Plants | Plants | 100 | 9.42e-17 | NTclustered | gi|162134245|gb|EU123948.1| | 160068 | g25117 | i0 | 84.314 | 2.01038062283737 | 102 | 16 | 35 | 0 | 50 | 151 | 5267 | 5368 | Trebouxia aggregata strain SAG 219-1d ribosomal protein S2 (rps2) gene, complete cds; tRNA-Met (trnMe(cau)) and large subunit ribosomal RNA (rnl) genes, complete sequence; putative site-specific DNA endonuclease (orf365) gene, complete cds; small subunit ribosomal RNA (rns) and tRNA-Met (trnMf(cau)) genes, complete sequence; cytochrome c oxidase subunit 1 (cox1), putative site-specific DNA endonuclease (orf335), and putative site-specific DNA endonuclease (orf256) genes, complete cds; tRNA-Phe (trnF(gaa)) and tRNA-Lys (trnK(uuu)) genes, complete sequence; and apocytochrome b (cob) and putative site-specific DNA endonuclease (orf334) genes, complete cds; mitochondrial | blastn | 581 | 100 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia aggregata | |
| 10601402 | 10601402 | PRJNA356682_P_NODE_3229_length_809_cov_28.338315_g2606_i0 | PRJNA356682 | 3229 | 809 | 28.338315 | 229.25696835 | Desmodesmus abundans | 77547 | Plants | Plants | 1214 | 0 | NTclustered | gi|2312613210|ref|NC_066651.1| | 77547 | g2606 | i0 | 94.059 | 154.373300370828 | 808 | 35 | 99 | 3 | 1 | 808 | 74429 | 75223 | Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome | blastn | 124888 | 1214 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus abundans | |
| 11875927 | 11875927 | PRJNA356682_P_NODE_15770_length_358_cov_1.080702_g15080_i0 | PRJNA356682 | 15770 | 358 | 1.080702 | 3.86891316 | Dichotomosiphon tuberosus | 118263 | Plants | Plants | 76.8 | 2.01e-9 | NTclustered | gi|1482674745|gb|MH591079.1| | 118263 | g15080 | i0 | 76.351 | 0.41340782122905 | 148 | 31 | 41 | 4 | 13 | 158 | 34319 | 34464 | Dichotomosiphon tuberosus chloroplast | blastn | 148 | 76.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Dichotomosiphonaceae | Dichotomosiphon | Dichotomosiphon tuberosus | |
| 12550802 | 12550802 | PRJNA356682_P_NODE_26090_length_288_cov_1.376744_g25399_i0 | PRJNA356682 | 26090 | 288 | 1.376744 | 3.96502272 | Chlamydomonadales | 3042 | Plants | Plants | 532 | 7.8e-147 | NTclustered | gi|1212783794|gb|MF083691.1| | 3055 | g25399 | i0 | 100 | 133.118055555556 | 288 | 0 | 100 | 0 | 1 | 288 | 37492 | 37205 | Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome | blastn | 38338 | 532 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 13150946 | 13150946 | PRJNA356682_P_NODE_1471_length_1292_cov_154.776046_g1014_i0 | PRJNA356682 | 1471 | 1292 | 154.776046 | 1999.70651432 | Haematococcus lacustris | 44745 | Plants | Plants | 1118 | 0 | NTclustered | gi|1279575454|gb|MF683078.1| | 44745 | g1014 | i0 | 83.134 | 253.513931888545 | 1257 | 180 | 96 | 28 | 1 | 1242 | 3593 | 2354 | Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 327540 | 1118 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 16974702 | 16974702 | PRJNA356682_P_NODE_17834_length_339_cov_1.627820_g17143_i0 | PRJNA356682 | 17834 | 339 | 1.62782 | 5.5183098 | Tetradesmus obliquus | 3088 | Plants | Plants | 255 | 2.2700000000000002e-63 | NTclustered | gi|1240946758|gb|KX756228.1| | 3088 | g17143 | i0 | 81.05 | 4.72271386430678 | 343 | 46 | 98 | 12 | 7 | 339 | 16905 | 16572 | Tetradesmus obliquus mitochondrion, complete genome | blastn | 1601 | 255 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 20798831 | 20798831 | PRJNA356682_P_NODE_1997_length_1081_cov_207.302579_g1467_i0 | PRJNA356682 | 1997 | 1081 | 207.302579 | 2240.94087899 | Haematococcus lacustris | 44745 | Plants | Plants | 1072 | 0 | NTclustered | gi|1279575454|gb|MF683078.1| | 44745 | g1467 | i0 | 84.741 | 317.375578168363 | 1101 | 134 | 100 | 28 | 1 | 1081 | 2716 | 3802 | Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 343083 | 1072 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 22074072 | 22074072 | PRJNA356682_P_NODE_26278_length_287_cov_1.439252_g25587_i0 | PRJNA356682 | 26278 | 287 | 1.439252 | 4.13065324 | Blidingia sp. DT1 | 2022611 | Plants | Plants | 470 | 6.18e-128 | NTclustered | gi|1220117795|gb|KY401415.1| | 2022611 | g25587 | i0 | 96.181 | 99.4912891986063 | 288 | 9 | 100 | 2 | 1 | 287 | 1849 | 1563 | Blidingia sp. DT1 28S ribosomal RNA gene, partial sequence | blastn | 28554 | 470 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulvales | Ulvaceae | Blidingia | Blidingia sp. DT1 | |
| 23349875 | 23349875 | PRJNA356682_P_NODE_44939_length_241_cov_0.916667_g44248_i0 | PRJNA356682 | 44939 | 241 | 0.916667 | 2.20916747 | Trebouxia sp. SL0000003 | 3350044 | Plants | Plants | 104 | 5.9e-18 | NTclustered | gi|2917929628|emb|OZ234916.1| | 3350044 | g44248 | i0 | 86.957 | 0.809128630705394 | 92 | 12 | 38 | 0 | 4 | 95 | 372506 | 372597 | Trebouxia sp. SL0000003 genome assembly, chromosome: 11 | blastn | 195 | 104 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. SL0000003 | |
| 23349922 | 23349922 | PRJNA356682_P_NODE_47119_length_217_cov_7.277778_g46428_i0 | PRJNA356682 | 47119 | 217 | 7.277778 | 15.79277826 | Desmodesmus abundans | 77547 | Plants | Plants | 396 | 7.689999999999997e-106 | NTclustered | gi|2312613210|ref|NC_066651.1| | 77547 | g46428 | i0 | 99.539 | 149.161290322581 | 217 | 1 | 100 | 0 | 1 | 217 | 74044 | 74260 | Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome | blastn | 32368 | 396 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus abundans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;