RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA352850" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA352850 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23348502 23348502 PRJNA352850_P_NODE_72479_length_263_cov_3.154206_g69646_i0 PRJNA352850 72479 263 3.154206 8.29556178 Gamsiella multidivaricata 101098 Fungi Fungi 143 1.38e-29   NTclustered gi|2323795724|ref|XM_051557003.1| 101098 g69646 i0 77.559 7.893536121673 254 45 94 10 7 254 367 120 Gamsiella multidivaricata ribosomal protein L24 (BC939DRAFT_461274), mRNA blastn 2076 143 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
25297998 25297998 PRJNA352850_P_NODE_80620_length_248_cov_2.356784_g77787_i0 PRJNA352850 80620 248 2.356784 5.84482432 Mucorales 4827 Fungi Fungi 374 4.2099999999999995e-99   NTclustered gi|2323717216|ref|XM_051576303.1| 101096 g77787 i0 94.958 45.383064516129 238 12 96 0 11 248 1134 1371 Gilbertella persicaria 60S ribosomal protein L3 (B0P05DRAFT_525307), mRNA blastn 11255 374 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;