RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA352850" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA352850 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1670393 1670393 PRJNA352850_P_NODE_44122_length_372_cov_3.024768_g41289_i0 PRJNA352850 44122 372 3.024768 11.25213696 Abditibacteriota bacterium 2783868 Bacteria Bacteria 307 6.84e-79   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g41289 i0 87.179 516.790322580645 273 32 73 2 1 272 2850965 2850695 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 192246 307 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
8048281 8048281 PRJNA352850_P_NODE_21527_length_616_cov_6.199295_g18743_i0 PRJNA352850 21527 616 6.199295 38.1876572 Abditibacteriota bacterium 2783868 Bacteria Bacteria 713 0   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g18743 i0 89.138 278.965909090909 580 53 94 10 40 616 2851016 2851588 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 171843 713 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
23347309 23347309 PRJNA352850_P_NODE_33779_length_449_cov_4.587500_g30949_i0 PRJNA352850 33779 449 4.5875 20.597875 Abditibacteriota bacterium 2783868 Bacteria Bacteria 510 5.97e-140   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g30949 i0 87.668 173.654788418708 446 45 98 8 9 448 2852025 2851584 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 77971 510 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;