RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA352850" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA352850 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19521747 19521747 PRJNA352850_P_NODE_50856_length_337_cov_2.083333_g48023_i0 PRJNA352850 50856 337 2.083333 7.02083221 Scuticavirus SMA6 2011078 Viruses Viruses 425 1.63e-114   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g48023 i0 89.552 9.67062314540059 335 35 99 0 1 335 4412 4078 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 3259 425 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
23347698 23347698 PRJNA352850_P_NODE_46279_length_360_cov_3.366559_g43446_i0 PRJNA352850 46279 360 3.366559 12.1196124 Scuticavirus SMA6 2011078 Viruses Viruses 532 9.99e-147   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g43446 i0 93.333 8.61944444444444 360 24 100 0 1 360 1535 1176 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 3103 532 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;