contig_metadata
54 rows where analysis = "blastn", bioproject = "PRJNA352610" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393626 | 393626 | PRJNA352610_P_NODE_10801_length_358_cov_1.350877_g10740_i0 | PRJNA352610 | 10801 | 358 | 1.350877 | 4.83613966 | Thiorhodovibrio winogradskyi | 77007 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|2659453538|gb|CP121472.1| | 77007 | g10740 | i0 | 100 | 0.0782122905027933 | 28 | 0 | 8 | 0 | 176 | 203 | 3278195 | 3278168 | Thiorhodovibrio winogradskyi strain DSM 6702 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Thiorhodovibrio | Thiorhodovibrio winogradskyi | ||
| 393750 | 393750 | PRJNA352610_P_NODE_17641_length_296_cov_1.022422_g17580_i0 | PRJNA352610 | 17641 | 296 | 1.022422 | 3.02636912 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 542 | 1.34e-149 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g17580 | i0 | 99.662 | 10.8682432432432 | 296 | 1 | 100 | 0 | 1 | 296 | 2512308 | 2512603 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 3217 | 542 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 393911 | 393911 | PRJNA352610_P_NODE_25581_length_250_cov_1.305085_g25520_i0 | PRJNA352610 | 25581 | 250 | 1.305085 | 3.2627125 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 344 | 3.34e-90 | NTclustered | gi|1900389202|gb|CP017024.1| | 47885 | g25520 | i0 | 91.6 | 9.28 | 250 | 20 | 99 | 1 | 1 | 249 | 4464791 | 4465040 | Pseudomonas oryzihabitans strain KNF2016 chromosome, complete genome | blastn | 2320 | 344 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 394106 | 394106 | PRJNA352610_P_NODE_6121_length_443_cov_2.048649_g6060_i0 | PRJNA352610 | 6121 | 443 | 2.048649 | 9.07551507 | Marinobacter alexandrii | 2570351 | Bacteria | Bacteria | 76.8 | 2.54e-9 | NTclustered | gi|2626243567|emb|OY829390.1| | 2570351 | g6060 | i0 | 95.745 | 27.1241534988713 | 47 | 2 | 11 | 0 | 211 | 257 | 3157710 | 3157664 | MAG: Marinobacter alexandrii isolate 78648b50-2abc-418f-b92f-8dc6f39ea282 genome assembly, chromosome: 1 | blastn | 12016 | 76.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Marinobacteraceae | Marinobacter | Marinobacter alexandrii | ||
| 1070532 | 1070532 | PRJNA352610_P_NODE_6961_length_424_cov_0.863248_g6900_i0 | PRJNA352610 | 6961 | 424 | 0.863248 | 3.66017152 | Acinetobacter | 469 | Bacteria | Bacteria | 767 | 0 | NTclustered | gi|1537789200|gb|CP032135.1| | 29430 | g6900 | i0 | 99.292 | 580.405660377358 | 424 | 3 | 100 | 0 | 1 | 424 | 828941 | 829364 | Acinetobacter haemolyticus strain sz1652 chromosome, complete genome | blastn | 246092 | 773 | 0.992238033635188 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter haemolyticus | ||
| 1668375 | 1668375 | PRJNA352610_P_NODE_17662_length_296_cov_0.847534_g17601_i0 | PRJNA352610 | 17662 | 296 | 0.847534 | 2.50870064 | Thermithiobacillus tepidarius | 929 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2921359895|gb|CP133759.1| | 1123368 | g17601 | i0 | 100 | 0.0945945945945946 | 28 | 0 | 9 | 0 | 136 | 163 | 2148595 | 2148568 | Thermithiobacillus tepidarius DSM 3134 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Acidithiobacillia | Acidithiobacillales | Thermithiobacillaceae | Thermithiobacillus | Thermithiobacillus tepidarius | ||
| 1668569 | 1668569 | PRJNA352610_P_NODE_26662_length_249_cov_0.875000_g26601_i0 | PRJNA352610 | 26662 | 249 | 0.875 | 2.17875 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 427 | 3.2e-115 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g26601 | i0 | 97.59 | 100.417670682731 | 249 | 6 | 100 | 0 | 1 | 249 | 1515657 | 1515409 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 25004 | 427 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 1668645 | 1668645 | PRJNA352610_P_NODE_30042_length_244_cov_0.900585_g29981_i0 | PRJNA352610 | 30042 | 244 | 0.900585 | 2.1974274 | Aquabacterium olei | 1296669 | Bacteria | Bacteria | 379 | 8.889999999999998e-101 | NTclustered | gi|1387992375|gb|CP029210.1| | 1296669 | g29981 | i0 | 94.672 | 68.5368852459016 | 244 | 13 | 100 | 0 | 1 | 244 | 3730491 | 3730734 | Aquabacterium olei strain NBRC 110486 chromosome, complete genome | blastn | 16723 | 379 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium olei | |||
| 2944529 | 2944529 | PRJNA352610_P_NODE_25843_length_250_cov_0.870056_g25782_i0 | PRJNA352610 | 25843 | 250 | 0.870056 | 2.17514 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g25782 | i0 | 100 | 48.44 | 250 | 0 | 100 | 0 | 1 | 250 | 1004336 | 1004585 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 12110 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 2944721 | 2944721 | PRJNA352610_P_NODE_5183_length_473_cov_1.280000_g5122_i0 | PRJNA352610 | 5183 | 473 | 1.28 | 6.0544 | Citrobacter amalonaticus | 35703 | Bacteria | Bacteria | 204 | 1.2e-47 | NTclustered | gi|815958227|gb|CP011132.1| | 1261127 | g5122 | i0 | 74.633 | 96.2071881606765 | 477 | 113 | 99 | 8 | 2 | 473 | 141374 | 140901 | Citrobacter amalonaticus Y19, complete genome | blastn | 45506 | 204 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Citrobacter | Citrobacter amalonaticus | ||
| 4898403 | 4898403 | PRJNA352610_P_NODE_31964_length_241_cov_0.916667_g31903_i0 | PRJNA352610 | 31964 | 241 | 0.916667 | 2.20916747 | Pseudomonas | 286 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g31903 | i0 | 100 | 26.0373443983402 | 241 | 0 | 100 | 0 | 1 | 241 | 4908090 | 4907850 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 6275 | 446 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 5497262 | 5497262 | PRJNA352610_P_NODE_13065_length_333_cov_1.184615_g13004_i0 | PRJNA352610 | 13065 | 333 | 1.184615 | 3.94476795 | Alcanivorax sp. | 1872427 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|2021960083|gb|CP051253.1| | 1872427 | g13004 | i0 | 100 | 0.168168168168168 | 28 | 0 | 8 | 0 | 256 | 283 | 3160089 | 3160116 | MAG: Alcanivorax sp. isolate oa2 chromosome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Alcanivoracaceae | Alcanivorax | Alcanivorax sp. | ||
| 6771514 | 6771514 | PRJNA352610_P_NODE_27186_length_248_cov_0.880000_g27125_i0 | PRJNA352610 | 27186 | 248 | 0.88 | 2.1824 | Aquabacterium olei | 1296669 | Bacteria | Bacteria | 267 | 7.36e-67 | NTclustered | gi|1387992375|gb|CP029210.1| | 1296669 | g27125 | i0 | 86.179 | 65.9274193548387 | 246 | 34 | 99 | 0 | 1 | 246 | 2508321 | 2508076 | Aquabacterium olei strain NBRC 110486 chromosome, complete genome | blastn | 16350 | 267 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium olei | |||
| 8046961 | 8046961 | PRJNA352610_P_NODE_16427_length_305_cov_1.237069_g16366_i0 | PRJNA352610 | 16427 | 305 | 1.237069 | 3.77306045 | [Haemophilus] ducreyi | 730 | Bacteria | Bacteria | 564 | 2.95e-156 | NTclustered | gi|857113445|gb|CP011220.1| | 730 | g16366 | i0 | 100 | 362.118032786885 | 305 | 0 | 100 | 0 | 1 | 305 | 1639229 | 1639533 | [Haemophilus] ducreyi strain NZS3 chromosome | blastn | 110446 | 564 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | [Haemophilus] ducreyi | ||
| 8047019 | 8047019 | PRJNA352610_P_NODE_19367_length_285_cov_0.787736_g19306_i0 | PRJNA352610 | 19367 | 285 | 0.787736 | 2.2450476 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 460 | 3.69e-125 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g19306 | i0 | 95.789 | 10.9333333333333 | 285 | 12 | 100 | 0 | 1 | 285 | 926554 | 926270 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 3116 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 8047131 | 8047131 | PRJNA352610_P_NODE_25207_length_251_cov_0.865169_g25146_i0 | PRJNA352610 | 25207 | 251 | 0.865169 | 2.17157419 | Aquipseudomonas alcaligenes | 43263 | Bacteria | Bacteria | 448 | 2.48e-121 | NTclustered | gi|1009291925|gb|CP014784.1| | 43263 | g25146 | i0 | 98.805 | 98.1633466135458 | 251 | 3 | 100 | 0 | 1 | 251 | 1358764 | 1359014 | Aquipseudomonas alcaligenes strain NEB 585, complete genome | blastn | 24639 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 8047141 | 8047141 | PRJNA352610_P_NODE_25727_length_250_cov_0.870056_g25666_i0 | PRJNA352610 | 25727 | 250 | 0.870056 | 2.17514 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 435 | 1.92e-117 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g25666 | i0 | 98 | 81.524 | 250 | 5 | 100 | 0 | 1 | 250 | 4203408 | 4203159 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 20381 | 435 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 8047168 | 8047168 | PRJNA352610_P_NODE_27307_length_248_cov_0.880000_g27246_i0 | PRJNA352610 | 27307 | 248 | 0.88 | 2.1824 | Bradyrhizobium sp. SK17 | 2057741 | Bacteria | Bacteria | 158 | 4.62e-34 | NTclustered | gi|1304130835|gb|CP025113.1| | 2057741 | g27246 | i0 | 85.43 | 0.608870967741935 | 151 | 22 | 61 | 0 | 98 | 248 | 126937 | 126787 | Bradyrhizobium sp. SK17 chromosome, complete genome | blastn | 151 | 158 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. SK17 | ||
| 9321765 | 9321765 | PRJNA352610_P_NODE_19408_length_284_cov_1.459716_g19347_i0 | PRJNA352610 | 19408 | 284 | 1.459716 | 4.14559344 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 492 | 1.2999999999999999e-134 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g19347 | i0 | 97.887 | 4.00704225352113 | 284 | 6 | 100 | 0 | 1 | 284 | 554217 | 553934 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 1138 | 492 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 9321901 | 9321901 | PRJNA352610_P_NODE_26128_length_250_cov_0.870056_g26067_i0 | PRJNA352610 | 26128 | 250 | 0.870056 | 2.17514 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 451 | 1.91e-122 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g26067 | i0 | 99.203 | 32.136 | 251 | 1 | 100 | 1 | 1 | 250 | 4255961 | 4255711 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 8034 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 9322039 | 9322039 | PRJNA352610_P_NODE_4108_length_518_cov_1.784270_g4047_i0 | PRJNA352610 | 4108 | 518 | 1.78427 | 9.2425186 | Aquipseudomonas alcaligenes | 43263 | Bacteria | Bacteria | 929 | 0 | NTclustered | gi|1958576591|dbj|AP024354.1| | 43263 | g4047 | i0 | 99.035 | 377.015444015444 | 518 | 5 | 100 | 0 | 1 | 518 | 722468 | 722985 | Pseudomonas alcaligenes KAM426 DNA, complete genome | blastn | 195294 | 929 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 9998701 | 9998701 | PRJNA352610_P_NODE_28028_length_247_cov_0.885057_g27967_i0 | PRJNA352610 | 28028 | 247 | 0.885057 | 2.18609079 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2669415207|gb|CP143898.1| | 287 | g27967 | i0 | 99.595 | 219.623481781377 | 247 | 1 | 100 | 0 | 1 | 247 | 6137040 | 6136794 | Pseudomonas aeruginosa strain PA11_WM3_21.22_ST27 chromosome, complete genome | blastn | 54247 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 10597837 | 10597837 | PRJNA352610_P_NODE_7749_length_406_cov_1.717718_g7688_i0 | PRJNA352610 | 7749 | 406 | 1.717718 | 6.97393508 | Acinetobacter lwoffii | 28090 | Bacteria | Bacteria | 52.8 | 0.039 | NTclustered | gi|2171325480|gb|CP083571.1| | 28090 | g7688 | i0 | 100 | 0.206896551724138 | 28 | 0 | 7 | 0 | 115 | 142 | 2806267 | 2806240 | Acinetobacter lwoffii strain ED9-5a chromosome, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 10597866 | 10597866 | PRJNA352610_P_NODE_8829_length_386_cov_1.476038_g8768_i0 | PRJNA352610 | 8829 | 386 | 1.476038 | 5.69750668 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g8768 | i0 | 97.409 | 9.00777202072539 | 386 | 10 | 100 | 0 | 1 | 386 | 1017860 | 1018245 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 3477 | 658 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 11273765 | 11273765 | PRJNA352610_P_NODE_5689_length_456_cov_3.744125_g5628_i0 | PRJNA352610 | 5689 | 456 | 3.744125 | 17.07321 | Acinetobacter | 469 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g5628 | i0 | 100 | 692.344298245614 | 455 | 0 | 99 | 0 | 1 | 455 | 469698 | 469244 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 315709 | 841 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 11273771 | 11273771 | PRJNA352610_P_NODE_8149_length_398_cov_1.163077_g8088_i0 | PRJNA352610 | 8149 | 398 | 1.163077 | 4.62904646 | Ralstonia | 48736 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|1474492343|gb|CP022776.1| | 305 | g8088 | i0 | 97.236 | 212.36432160804 | 398 | 11 | 100 | 0 | 1 | 398 | 352363 | 352760 | Ralstonia solanacearum strain T11 chromosome, complete genome | blastn | 84521 | 675 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 11872529 | 11872529 | PRJNA352610_P_NODE_27510_length_248_cov_0.880000_g27449_i0 | PRJNA352610 | 27510 | 248 | 0.88 | 2.1824 | Methylorubrum populi | 223967 | Bacteria | Bacteria | 296 | 9.39e-76 | NTclustered | gi|1024840729|dbj|AP014809.1| | 223967 | g27449 | i0 | 88.259 | 3.78629032258065 | 247 | 29 | 99 | 0 | 1 | 247 | 2777822 | 2777576 | Methylobacterium populi DNA, complete genome | blastn | 939 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum populi | ||
| 13147521 | 13147521 | PRJNA352610_P_NODE_25391_length_251_cov_0.865169_g25330_i0 | PRJNA352610 | 25391 | 251 | 0.865169 | 2.17157419 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 420 | 5.41e-113 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g25330 | i0 | 96.813 | 9.37450199203187 | 251 | 8 | 100 | 0 | 1 | 251 | 460697 | 460447 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 2353 | 420 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 13147533 | 13147533 | PRJNA352610_P_NODE_26131_length_250_cov_0.870056_g26070_i0 | PRJNA352610 | 26131 | 250 | 0.870056 | 2.17514 | Paraburkholderia aromaticivorans | 2026199 | Bacteria | Bacteria | 67.6 | 8.09e-7 | NTclustered | gi|1834249844|gb|CP051515.1| | 2026199 | g26070 | i0 | 95.238 | 0.296 | 42 | 2 | 17 | 0 | 1 | 42 | 1270128 | 1270169 | Paraburkholderia aromaticivorans strain AR20-38 chromosome 2, complete sequence | blastn | 74 | 67.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia aromaticivorans | ||
| 13147601 | 13147601 | PRJNA352610_P_NODE_29971_length_244_cov_0.900585_g29910_i0 | PRJNA352610 | 29971 | 244 | 0.900585 | 2.1974274 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 403 | 5.27e-108 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g29910 | i0 | 97.071 | 2.94672131147541 | 239 | 7 | 98 | 0 | 6 | 244 | 4257094 | 4257332 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 719 | 403 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 13147632 | 13147632 | PRJNA352610_P_NODE_31991_length_241_cov_0.916667_g31930_i0 | PRJNA352610 | 31991 | 241 | 0.916667 | 2.20916747 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g31930 | i0 | 99.585 | 6.95435684647303 | 241 | 1 | 100 | 0 | 1 | 241 | 1946895 | 1946655 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 1676 | 440 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 13823980 | 13823980 | PRJNA352610_P_NODE_29111_length_245_cov_0.895349_g29050_i0 | PRJNA352610 | 29111 | 245 | 0.895349 | 2.19360505 | Bradyrhizobium | 374 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2283162160|gb|CP028989.1| | 244734 | g29050 | i0 | 99.592 | 53.6857142857143 | 245 | 1 | 100 | 0 | 1 | 245 | 1878523 | 1878279 | Bradyrhizobium betae strain WBOS16 chromosome | blastn | 13153 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium betae | ||
| 14422668 | 14422668 | PRJNA352610_P_NODE_26732_length_249_cov_0.875000_g26671_i0 | PRJNA352610 | 26732 | 249 | 0.875 | 2.17875 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g26671 | i0 | 100 | 3.26104417670683 | 249 | 0 | 100 | 0 | 1 | 249 | 1223889 | 1223641 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 812 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 14422683 | 14422683 | PRJNA352610_P_NODE_27732_length_247_cov_0.885057_g27671_i0 | PRJNA352610 | 27732 | 247 | 0.885057 | 2.18609079 | Bradyrhizobium sp. SK17 | 2057741 | Bacteria | Bacteria | 429 | 8.83e-116 | NTclustered | gi|1304130835|gb|CP025113.1| | 2057741 | g27671 | i0 | 97.976 | 98.5384615384615 | 247 | 5 | 100 | 0 | 1 | 247 | 3136458 | 3136704 | Bradyrhizobium sp. SK17 chromosome, complete genome | blastn | 24339 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. SK17 | ||
| 14422699 | 14422699 | PRJNA352610_P_NODE_28772_length_246_cov_0.890173_g28711_i0 | PRJNA352610 | 28772 | 246 | 0.890173 | 2.18982558 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g28711 | i0 | 99.187 | 14.2926829268293 | 246 | 2 | 100 | 0 | 1 | 246 | 4350039 | 4350284 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 3516 | 444 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 15098346 | 15098346 | PRJNA352610_P_NODE_8912_length_385_cov_1.189103_g8851_i0 | PRJNA352610 | 8912 | 385 | 1.189103 | 4.57804655 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.037 | NTclustered | gi|2563036165|gb|CP132290.1| | 615 | g8851 | i0 | 100 | 0.145454545454545 | 28 | 0 | 7 | 0 | 23 | 50 | 2971159 | 2971186 | Serratia marcescens strain X1 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia marcescens | ||
| 15696503 | 15696503 | PRJNA352610_P_NODE_25433_length_251_cov_0.865169_g25372_i0 | PRJNA352610 | 25433 | 251 | 0.865169 | 2.17157419 | Bradyrhizobium sp. SK17 | 2057741 | Bacteria | Bacteria | 398 | 2.5399999999999994e-106 | NTclustered | gi|1304130835|gb|CP025113.1| | 2057741 | g25372 | i0 | 95.219 | 30.3625498007968 | 251 | 12 | 100 | 0 | 1 | 251 | 3710373 | 3710623 | Bradyrhizobium sp. SK17 chromosome, complete genome | blastn | 7621 | 398 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. SK17 | ||
| 18245351 | 18245351 | PRJNA352610_P_NODE_19335_length_285_cov_1.056604_g19274_i0 | PRJNA352610 | 19335 | 285 | 1.056604 | 3.0113214 | Amaricoccus sp. B4 | 3368557 | Bacteria | Bacteria | 416 | 8.1e-112 | NTclustered | gi|2832808638|gb|CP171226.1| | 3368557 | g19274 | i0 | 93.548 | 168.866666666667 | 279 | 18 | 98 | 0 | 5 | 283 | 120215 | 120493 | Amaricoccus sp. B4 plasmid unnamed1, complete sequence | blastn | 48127 | 416 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Amaricoccus | Amaricoccus sp. B4 | ||
| 18245599 | 18245599 | PRJNA352610_P_NODE_30075_length_244_cov_0.894737_g30014_i0 | PRJNA352610 | 30075 | 244 | 0.894737 | 2.18315828 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1274888509|gb|CP024444.1| | 34062 | g30014 | i0 | 100 | 5 | 244 | 0 | 100 | 0 | 1 | 244 | 37044 | 37287 | Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence | blastn | 1220 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 19519729 | 19519729 | PRJNA352610_P_NODE_28416_length_246_cov_0.890173_g28355_i0 | PRJNA352610 | 28416 | 246 | 0.890173 | 2.18982558 | Pseudoxanthomonas sp. NC8 | 2758562 | Bacteria | Bacteria | 257 | 4.39e-64 | NTclustered | gi|2304088992|gb|CP060419.1| | 2758562 | g28355 | i0 | 85.95 | 8.83333333333333 | 242 | 32 | 98 | 2 | 3 | 243 | 2220077 | 2219837 | Pseudoxanthomonas sp. NC8 chromosome, complete genome | blastn | 2173 | 257 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas sp. NC8 | ||
| 19519735 | 19519735 | PRJNA352610_P_NODE_28736_length_246_cov_0.890173_g28675_i0 | PRJNA352610 | 28736 | 246 | 0.890173 | 2.18982558 | Pseudomonas fulva | 47880 | Bacteria | Bacteria | 73.1 | 1.71e-8 | NTclustered | gi|2557490064|gb|CP130566.1| | 47880 | g28675 | i0 | 97.619 | 53.6626016260163 | 42 | 1 | 18 | 0 | 13 | 54 | 3441452 | 3441493 | Pseudomonas fulva strain F8_7S_9B chromosome, complete genome | blastn | 13201 | 73.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fulva | ||
| 19519787 | 19519787 | PRJNA352610_P_NODE_30956_length_242_cov_0.911243_g30895_i0 | PRJNA352610 | 30956 | 242 | 0.911243 | 2.20520806 | Methylorubrum extorquens | 408 | Bacteria | Bacteria | 418 | 1.8699999999999998e-112 | NTclustered | gi|240012920|gb|CP001513.1| | 272630 | g30895 | i0 | 97.925 | 0.995867768595041 | 241 | 5 | 99 | 0 | 1 | 241 | 28910 | 28670 | Methylobacterium extorquens AM1 plasmid p2META1, complete sequence | blastn | 241 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum extorquens | ||
| 20196596 | 20196596 | PRJNA352610_P_NODE_27996_length_247_cov_0.885057_g27935_i0 | PRJNA352610 | 27996 | 247 | 0.885057 | 2.18609079 | Acinetobacter | 469 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2429879842|gb|CP115963.1| | 40215 | g27935 | i0 | 100 | 19.0121457489879 | 247 | 0 | 100 | 0 | 1 | 247 | 2040038 | 2039792 | Acinetobacter junii strain mNGS2101_17 chromosome, complete genome | blastn | 4696 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter junii | ||
| 20196599 | 20196599 | PRJNA352610_P_NODE_28636_length_246_cov_0.890173_g28575_i0 | PRJNA352610 | 28636 | 246 | 0.890173 | 2.18982558 | Bradyrhizobium | 374 | Bacteria | Bacteria | 331 | 2.55e-86 | NTclustered | gi|2165307131|gb|CP088282.1| | 2748629 | g28575 | i0 | 91.057 | 21.7357723577236 | 246 | 21 | 100 | 1 | 1 | 246 | 4831679 | 4831923 | Bradyrhizobium quebecense strain 12S5 chromosome, complete genome | blastn | 5347 | 331 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium quebecense | ||
| 20795280 | 20795280 | PRJNA352610_P_NODE_25197_length_251_cov_0.865169_g25136_i0 | PRJNA352610 | 25197 | 251 | 0.865169 | 2.17157419 | Alteromonas mediterranea | 314275 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1784831962|gb|CP046670.1| | 314275 | g25136 | i0 | 100 | 0.717131474103586 | 30 | 0 | 12 | 0 | 192 | 221 | 1006170 | 1006199 | Alteromonas mediterranea strain AltCH17 chromosome, complete genome | blastn | 180 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Alteromonadaceae | Alteromonas | Alteromonas mediterranea | ||
| 20795360 | 20795360 | PRJNA352610_P_NODE_28737_length_246_cov_0.890173_g28676_i0 | PRJNA352610 | 28737 | 246 | 0.890173 | 2.18982558 | Bradyrhizobium sp. SK17 | 2057741 | Bacteria | Bacteria | 399 | 6.889999999999999e-107 | NTclustered | gi|1304130835|gb|CP025113.1| | 2057741 | g28676 | i0 | 95.935 | 5.11382113821138 | 246 | 10 | 100 | 0 | 1 | 246 | 351024 | 351269 | Bradyrhizobium sp. SK17 chromosome, complete genome | blastn | 1258 | 399 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. SK17 | ||
| 20795367 | 20795367 | PRJNA352610_P_NODE_28917_length_245_cov_1.622093_g28856_i0 | PRJNA352610 | 28917 | 245 | 1.622093 | 3.97412785 | Brevundimonas pondensis | 2774189 | Bacteria | Bacteria | 403 | 5.299999999999998e-108 | NTclustered | gi|2008191240|gb|CP062006.1| | 2774189 | g28856 | i0 | 96.327 | 22.8244897959184 | 245 | 9 | 100 | 0 | 1 | 245 | 1565905 | 1565661 | Brevundimonas pondensis strain LVF1 chromosome, complete genome | blastn | 5592 | 403 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas pondensis | ||
| 22070254 | 22070254 | PRJNA352610_P_NODE_20898_length_275_cov_1.381188_g20837_i0 | PRJNA352610 | 20898 | 275 | 1.381188 | 3.798267 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 486 | 5.8499999999999985e-133 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g20837 | i0 | 98.545 | 1.69090909090909 | 275 | 4 | 100 | 0 | 1 | 275 | 3735011 | 3734737 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 465 | 486 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 22070356 | 22070356 | PRJNA352610_P_NODE_25478_length_251_cov_0.865169_g25417_i0 | PRJNA352610 | 25478 | 251 | 0.865169 | 2.17157419 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 403 | 5.45e-108 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g25417 | i0 | 96.327 | 8.52589641434263 | 245 | 9 | 98 | 0 | 7 | 251 | 2669002 | 2669246 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 2140 | 403 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 23345715 | 23345715 | PRJNA352610_P_NODE_22839_length_263_cov_1.621053_g22778_i0 | PRJNA352610 | 22839 | 263 | 1.621053 | 4.26336939 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 475 | 1.2e-129 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g22778 | i0 | 99.24 | 67.9695817490494 | 263 | 2 | 100 | 0 | 1 | 263 | 2841776 | 2842038 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 17876 | 475 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 23345771 | 23345771 | PRJNA352610_P_NODE_25839_length_250_cov_0.870056_g25778_i0 | PRJNA352610 | 25839 | 250 | 0.870056 | 2.17514 | Ralstonia mannitolilytica | 105219 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1021441185|gb|CP011257.1| | 105219 | g25778 | i0 | 100 | 69.4 | 250 | 0 | 100 | 0 | 1 | 250 | 981510 | 981261 | Ralstonia mannitolilytica strain SN83A39 chromosome 1, complete sequence | blastn | 17350 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia mannitolilytica | ||
| 24022305 | 24022305 | PRJNA352610_P_NODE_27119_length_248_cov_0.880000_g27058_i0 | PRJNA352610 | 27119 | 248 | 0.88 | 2.1824 | Cereibacter | 1653176 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1523749348|gb|CP033442.1| | 1063 | g27058 | i0 | 100 | 1.99193548387097 | 29 | 0 | 12 | 0 | 217 | 245 | 315517 | 315545 | Cereibacter sphaeroides strain AB25 chromosome 1 | blastn | 494 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Cereibacter | Cereibacter sphaeroides | ||
| 24620008 | 24620008 | PRJNA352610_P_NODE_24560_length_253_cov_1.533333_g24499_i0 | PRJNA352610 | 24560 | 253 | 1.533333 | 3.87933249 | Pseudomonas oryzihabitans | 47885 | Bacteria | Bacteria | 457 | 4.16e-124 | NTclustered | gi|1751056302|gb|CP044074.1| | 47885 | g24499 | i0 | 99.209 | 85.2806324110672 | 253 | 2 | 100 | 0 | 1 | 253 | 2113039 | 2112787 | Pseudomonas oryzihabitans strain FDAARGOS_657 chromosome, complete genome | blastn | 21576 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas oryzihabitans | ||
| 24620073 | 24620073 | PRJNA352610_P_NODE_27920_length_247_cov_0.885057_g27859_i0 | PRJNA352610 | 27920 | 247 | 0.885057 | 2.18609079 | Acinetobacter sp. LUNF3 | 2925837 | Bacteria | Bacteria | 424 | 4.1099999999999996e-114 | NTclustered | gi|2212388819|gb|CP093968.1| | 2925837 | g27859 | i0 | 97.571 | 41.919028340081 | 247 | 6 | 100 | 0 | 1 | 247 | 352431 | 352677 | Acinetobacter sp. LUNF3 chromosome, complete genome | blastn | 10354 | 424 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. LUNF3 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;