contig_metadata
28 rows where analysis = "blastn", bioproject = "PRJNA352610" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393653 | 393653 | PRJNA352610_P_NODE_12521_length_339_cov_0.770677_g12460_i0 | PRJNA352610 | 12521 | 339 | 0.770677 | 2.61259503 | Corynebacterium sp. YSMAA1_1_F7 | 3383590 | Bacteria | Bacteria | 564 | 3.33e-156 | NTclustered | gi|2869833946|gb|CP175789.1| | 3383590 | g12460 | i0 | 96.755 | 343.6401179941 | 339 | 9 | 100 | 2 | 1 | 339 | 796219 | 795883 | Corynebacterium sp. YSMAA1_1_F7 chromosome, complete genome | blastn | 116494 | 564 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_F7 | ||
| 393865 | 393865 | PRJNA352610_P_NODE_23521_length_259_cov_1.467742_g23460_i0 | PRJNA352610 | 23521 | 259 | 1.467742 | 3.80145178 | Streptomyces poriferorum | 2798799 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2562642067|gb|CP120990.1| | 2798799 | g23460 | i0 | 96.97 | 0.563706563706564 | 33 | 1 | 13 | 0 | 61 | 93 | 4933402 | 4933370 | Streptomyces poriferorum strain Alt1 chromosome, complete genome | blastn | 146 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces poriferorum | ||
| 2345891 | 2345891 | PRJNA352610_P_NODE_62_length_1962_cov_3.499735_g58_i0 | PRJNA352610 | 62 | 1962 | 3.499735 | 68.6648007 | Cutibacterium | 1912216 | Bacteria | Bacteria | 3613 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g58 | i0 | 99.898 | 281.995922528033 | 1962 | 2 | 100 | 0 | 1 | 1962 | 606992 | 608953 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 553276 | 3613 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 3621174 | 3621174 | PRJNA352610_P_NODE_25063_length_251_cov_0.865169_g25002_i0 | PRJNA352610 | 25063 | 251 | 0.865169 | 2.17157419 | Cutibacterium | 1912216 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g25002 | i0 | 100 | 53.00796812749 | 251 | 0 | 100 | 0 | 1 | 251 | 159969 | 160219 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13305 | 464 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 4220917 | 4220917 | PRJNA352610_P_NODE_15364_length_314_cov_0.834025_g15303_i0 | PRJNA352610 | 15364 | 314 | 0.834025 | 2.6188385 | Corynebacterium accolens | 38284 | Bacteria | Bacteria | 484 | 2.4399999999999998e-132 | NTclustered | gi|2242616707|gb|CP046605.1| | 38284 | g15303 | i0 | 98.195 | 284.200636942675 | 277 | 5 | 88 | 0 | 1 | 277 | 2012554 | 2012830 | Corynebacterium accolens strain DSM 44278 chromosome, complete genome | blastn | 89239 | 484 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 6173413 | 6173413 | PRJNA352610_P_NODE_26005_length_250_cov_0.870056_g25944_i0 | PRJNA352610 | 26005 | 250 | 0.870056 | 2.17514 | Cutibacterium | 1912216 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g25944 | i0 | 100 | 51 | 250 | 0 | 100 | 0 | 1 | 250 | 2262517 | 2262268 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12750 | 462 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 7448392 | 7448392 | PRJNA352610_P_NODE_18566_length_290_cov_0.834101_g18505_i0 | PRJNA352610 | 18566 | 290 | 0.834101 | 2.4188929 | Bacillati | 1783272 | Bacteria | Bacteria | 525 | 1.32e-144 | NTclustered | gi|1678593041|gb|CP035103.1| | 1275 | g18505 | i0 | 99.31 | 109.575862068966 | 290 | 2 | 100 | 0 | 1 | 290 | 2504874 | 2504585 | Kocuria rosea strain ATCC 186 chromosome, complete genome | blastn | 31777 | 525 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria rosea | ||
| 7448421 | 7448421 | PRJNA352610_P_NODE_29046_length_245_cov_0.895349_g28985_i0 | PRJNA352610 | 29046 | 245 | 0.895349 | 2.19360505 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g28985 | i0 | 99.592 | 52.1428571428571 | 245 | 1 | 100 | 0 | 1 | 245 | 2110036 | 2110280 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 12775 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8723080 | 8723080 | PRJNA352610_P_NODE_29807_length_244_cov_0.900585_g29746_i0 | PRJNA352610 | 29807 | 244 | 0.900585 | 2.1974274 | Cutibacterium | 1912216 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g29746 | i0 | 100 | 51 | 244 | 0 | 100 | 0 | 1 | 244 | 1347673 | 1347430 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12444 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9321977 | 9321977 | PRJNA352610_P_NODE_30028_length_244_cov_0.900585_g29967_i0 | PRJNA352610 | 30028 | 244 | 0.900585 | 2.1974274 | Streptomyces sp. NBC_01546 | 2975872 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2656295666|gb|CP109379.1| | 2975872 | g29967 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 191 | 218 | 4028124 | 4028097 | Streptomyces sp. NBC_01546 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01546 | ||
| 9998653 | 9998653 | PRJNA352610_P_NODE_10808_length_358_cov_1.350877_g10747_i0 | PRJNA352610 | 10808 | 358 | 1.350877 | 4.83613966 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.003 | NTclustered | gi|2657114941|gb|CP108188.1| | 68286 | g10747 | i0 | 100 | 19.108938547486 | 30 | 0 | 8 | 0 | 236 | 265 | 2576336 | 2576365 | Streptomyces zaomyceticus strain NBC_00123 chromosome, complete genome | blastn | 6841 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces zaomyceticus | ||
| 11273715 | 11273715 | PRJNA352610_P_NODE_20089_length_280_cov_1.487923_g20028_i0 | PRJNA352610 | 20089 | 280 | 1.487923 | 4.1661844 | Cutibacterium | 1912216 | Bacteria | Bacteria | 518 | 2.12e-142 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g20028 | i0 | 100 | 51 | 280 | 0 | 100 | 0 | 1 | 280 | 1057627 | 1057906 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 14280 | 518 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11273751 | 11273751 | PRJNA352610_P_NODE_31469_length_241_cov_1.827381_g31408_i0 | PRJNA352610 | 31469 | 241 | 1.827381 | 4.40398821 | Cutibacterium | 1912216 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g31408 | i0 | 100 | 55.9336099585062 | 241 | 0 | 100 | 0 | 1 | 241 | 2231754 | 2231514 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 13480 | 446 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11872347 | 11872347 | PRJNA352610_P_NODE_1830_length_698_cov_1.376000_g1773_i0 | PRJNA352610 | 1830 | 698 | 1.376 | 9.60448 | Streptomyces clavuligerus | 1901 | Bacteria | Bacteria | 67.6 | 2.49e-6 | NTclustered | gi|1939990771|gb|CP065242.1| | 1901 | g1773 | i0 | 91.667 | 7.72349570200573 | 48 | 4 | 7 | 0 | 358 | 405 | 18608 | 18655 | Streptomyces clavuligerus strain F1D35 plasmid pF1D35A, complete sequence | blastn | 5391 | 67.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces clavuligerus | ||
| 12549010 | 12549010 | PRJNA352610_P_NODE_15870_length_310_cov_0.789030_g15809_i0 | PRJNA352610 | 15870 | 310 | 0.78903 | 2.445993 | Micrococcus | 1269 | Bacteria | Bacteria | 553 | 6.509999999999998e-153 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g15809 | i0 | 99.029 | 247.070967741935 | 309 | 2 | 99 | 1 | 3 | 310 | 346376 | 346068 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 76592 | 553 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 15696506 | 15696506 | PRJNA352610_P_NODE_25733_length_250_cov_0.870056_g25672_i0 | PRJNA352610 | 25733 | 250 | 0.870056 | 2.17514 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g25672 | i0 | 100 | 51 | 250 | 0 | 100 | 0 | 1 | 250 | 2211686 | 2211437 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 12750 | 462 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17648126 | 17648126 | PRJNA352610_P_NODE_14534_length_320_cov_1.085020_g14473_i0 | PRJNA352610 | 14534 | 320 | 1.08502 | 3.472064 | Corynebacterium | 1716 | Bacteria | Bacteria | 580 | 3.099999999999999e-161 | NTclustered | gi|2869817591|gb|CP175775.1| | 1979527 | g14473 | i0 | 99.375 | 361.75625 | 320 | 2 | 100 | 0 | 1 | 320 | 1898 | 1579 | Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome | blastn | 115762 | 580 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 17648164 | 17648164 | PRJNA352610_P_NODE_30174_length_243_cov_1.588235_g30113_i0 | PRJNA352610 | 30174 | 243 | 1.588235 | 3.85941105 | Cutibacterium | 1912216 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g30113 | i0 | 99.588 | 51.6255144032922 | 243 | 1 | 100 | 0 | 1 | 243 | 1631594 | 1631836 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12545 | 444 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 18921993 | 18921993 | PRJNA352610_P_NODE_29375_length_245_cov_0.895349_g29314_i0 | PRJNA352610 | 29375 | 245 | 0.895349 | 2.19360505 | Cutibacterium | 1912216 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g29314 | i0 | 100 | 52.9428571428571 | 245 | 0 | 100 | 0 | 1 | 245 | 782775 | 782531 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12971 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 19519724 | 19519724 | PRJNA352610_P_NODE_28056_length_247_cov_0.885057_g27995_i0 | PRJNA352610 | 28056 | 247 | 0.885057 | 2.18609079 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g27995 | i0 | 100 | 51 | 247 | 0 | 100 | 0 | 1 | 247 | 56767 | 56521 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 12597 | 457 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20196593 | 20196593 | PRJNA352610_P_NODE_26636_length_249_cov_0.875000_g26575_i0 | PRJNA352610 | 26636 | 249 | 0.875 | 2.17875 | Cutibacterium | 1912216 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g26575 | i0 | 100 | 18.9839357429719 | 249 | 0 | 100 | 0 | 1 | 249 | 2259291 | 2259539 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 4727 | 460 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20795278 | 20795278 | PRJNA352610_P_NODE_25117_length_251_cov_0.865169_g25056_i0 | PRJNA352610 | 25117 | 251 | 0.865169 | 2.17157419 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 448 | 2.48e-121 | NTclustered | gi|2415255273|gb|CP114143.1| | 1734925 | g25056 | i0 | 98.805 | 62.6653386454183 | 251 | 3 | 100 | 0 | 1 | 251 | 962299 | 962549 | Cutibacterium acnes subsp. acnes strain CCSM0331 chromosome, complete genome | blastn | 15729 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22747436 | 22747436 | PRJNA352610_P_NODE_18798_length_288_cov_1.334884_g18737_i0 | PRJNA352610 | 18798 | 288 | 1.334884 | 3.84446592 | Cutibacterium | 1912216 | Bacteria | Bacteria | 508 | 1.32e-139 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g18737 | i0 | 98.944 | 50.6979166666667 | 284 | 3 | 99 | 0 | 4 | 287 | 40983 | 40700 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 14601 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23345537 | 23345537 | PRJNA352610_P_NODE_13339_length_330_cov_1.513619_g13278_i0 | PRJNA352610 | 13339 | 330 | 1.513619 | 4.9949427 | Corynebacterium gottingense | 2041036 | Bacteria | Bacteria | 508 | 1.53e-139 | NTclustered | gi|2869851930|gb|CP175790.1| | 2041036 | g13278 | i0 | 95.062 | 347.7 | 324 | 14 | 100 | 2 | 1 | 323 | 2001930 | 2002252 | Corynebacterium gottingense strain YSMAA1_1_F6 chromosome, complete genome | blastn | 114741 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium gottingense | ||
| 23345848 | 23345848 | PRJNA352610_P_NODE_29839_length_244_cov_0.900585_g29778_i0 | PRJNA352610 | 29839 | 244 | 0.900585 | 2.1974274 | Corynebacterium jeddahense | 1414719 | Bacteria | Bacteria | 401 | 1.8999999999999998e-107 | NTclustered | gi|2443262567|gb|CP063194.1| | 1414719 | g29778 | i0 | 96.311 | 475.450819672131 | 244 | 9 | 100 | 0 | 1 | 244 | 917339 | 917096 | Corynebacterium jeddahense strain DSM 45997 chromosome, complete genome | blastn | 116010 | 401 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium jeddahense | ||
| 23345878 | 23345878 | PRJNA352610_P_NODE_31339_length_242_cov_0.911243_g31278_i0 | PRJNA352610 | 31339 | 242 | 0.911243 | 2.20520806 | Cutibacterium avidum | 33010 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2047661185|dbj|AP024309.1| | 33010 | g31278 | i0 | 100 | 45.7851239669422 | 242 | 0 | 100 | 0 | 1 | 242 | 270940 | 271181 | Cutibacterium avidum TPCV-14 DNA, complete genome | blastn | 11080 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium avidum | ||
| 24022307 | 24022307 | PRJNA352610_P_NODE_27339_length_248_cov_0.880000_g27278_i0 | PRJNA352610 | 27339 | 248 | 0.88 | 2.1824 | Cutibacterium | 1912216 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g27278 | i0 | 100 | 53 | 248 | 0 | 100 | 0 | 1 | 248 | 1826065 | 1825818 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 13144 | 459 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24022319 | 24022319 | PRJNA352610_P_NODE_31199_length_242_cov_0.911243_g31138_i0 | PRJNA352610 | 31199 | 242 | 0.911243 | 2.20520806 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g31138 | i0 | 100 | 68.896694214876 | 242 | 0 | 100 | 0 | 1 | 242 | 1959313 | 1959072 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 16673 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;