RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA352610" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA352610 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20795064 20795064 PRJNA352610_P_NODE_15417_length_313_cov_1.283333_g15356_i0 PRJNA352610 15417 313 1.283333 4.01683229 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 4.86e-5   NTclustered gi|1160563410|ref|XM_020579920.1| 670386 g15356 i0 100 5.49840255591054 33 0 11 0 136 168 821 853 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 1721 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
22070064 22070064 PRJNA352610_P_NODE_11958_length_344_cov_1.409594_g11897_i0 PRJNA352610 11958 344 1.409594 4.84900336 Cavenderia fasciculata 261658 Evosea other_Eukaryota 54.7 0.009   NTclustered gi|470244313|ref|XM_004355836.1| 261658 g11897 i0 96.97 0.0959302325581395 33 0 10 1 218 250 624 655 Cavenderia fasciculata uncharacterized protein (DFA_08400), partial mRNA blastn 33 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;