RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA348537" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA348537 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13147113 13147113 PRJNA348537_S_NODE_1551_length_234_cov_10.140704_g1505_i0 PRJNA348537 1551 234 10.140704 23.72924736 Mimiviridae sp. ChoanoV1 2596887 Viruses Viruses 54.7 0.006   NTclustered gi|1717456131|gb|MK250089.1| 2596887 g1505 i0 92.308 0.166666666666667 39 2 16 1 146 183 68236 68198 Mimiviridae sp. ChoanoV1 genomic sequence blastn 39 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae   Mimiviridae sp. ChoanoV1
17648049 17648049 PRJNA348537_S_NODE_1774_length_220_cov_14410.697297_g1728_i0 PRJNA348537 1774 220 14410.697297 31703.5340534 root 1 Root_unresolved Root_unresolved 73.1 1.5e-8   NTclustered gi|2755084441|gb|PP943425.1| 10258 g1728 i0 100 19.5363636363636 39 0 18 0 177 215 67586 67624 Orf virus isolate FX10, partial genome blastn 4298 73.1 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
20794875 20794875 PRJNA348537_S_NODE_1037_length_283_cov_10250.758065_g991_i0 PRJNA348537 1037 283 10250.758065 29009.64532395 Parapoxvirus orf 3431389 Viruses Viruses 75 5.57e-9   NTclustered gi|2755084565|gb|PP943426.1| 10258 g991 i0 100 15.1731448763251 40 0 14 0 3 42 121046 121085 Orf virus isolate FX17, partial genome blastn 4294 75 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
25296649 25296649 PRJNA348537_S_NODE_2340_length_197_cov_15619.598765_g2294_i0 PRJNA348537 2340 197 15619.598765 30770.60956705 root 1 Root_unresolved Root_unresolved 73.1 1.31e-8   NTclustered gi|2755084565|gb|PP943426.1| 10258 g2294 i0 100 22.5228426395939 39 0 20 0 157 195 121084 121046 Orf virus isolate FX17, partial genome blastn 4437 73.1 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;