RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA348537" and tax_clade = "Sar"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA348537 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1668144 1668144 PRJNA348537_S_NODE_2262_length_200_cov_6.709091_g2216_i0 PRJNA348537 2262 200 6.709091 13.418182 Actinosphaerium eichhornii 238769 SAR_Eukaryotes SAR_Eukaryotes 228 2.689999999999999e-55   NTclustered gi|34559230|gb|AY305011.1| 238769 g2216 i0 90.286 87.695 175 15 87 2 15 187 1472 1646 Actinosphaerium eichhornii small subunit ribosomal RNA gene, partial sequence blastn 17539 228 1 Eukaryota Sar     Actinophryidae     Actinosphaerium Actinosphaerium eichhornii
2345771 2345771 PRJNA348537_S_NODE_2022_length_209_cov_1.431034_g1976_i0 PRJNA348537 2022 209 1.431034 2.99086106 Bolivinitidae 46101 SAR_Eukaryotes SAR_Eukaryotes 305 1.27e-78   NTclustered gi|14530329|emb|AJ318224.1| 46080 g1976 i0 95.767 88.4306220095694 189 8 90 0 13 201 712 900 Astrammina triangularis 18S rRNA gene, isolate 118 blastn 18482 305 1 Eukaryota Sar   Foraminifera       Astrammina Astrammina triangularis
4220749 4220749 PRJNA348537_S_NODE_564_length_364_cov_12603.744681_g518_i0 PRJNA348537 564 364 12603.744681 45877.63063884 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 122 2.6e-23   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g518 i0 98.551 22.521978021978 69 1 19 0 295 363 413 345 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 8198 122 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
6771115 6771115 PRJNA348537_S_NODE_1486_length_238_cov_6288.527094_g1440_i0 PRJNA348537 1486 238 6288.527094 14966.69448372 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 71.3 5.9e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1440 i0 97.561 15.3613445378151 41 1 17 0 1 41 374 414 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3656 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
8722972 8722972 PRJNA348537_S_NODE_1507_length_237_cov_12986.034653_g1461_i0 PRJNA348537 1507 237 12986.034653 30776.90212761 root 1 Root_unresolved Root_unresolved 73.1 1.63e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1461 i0 100 18.3628691983122 39 0 16 0 1 39 375 413 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4352 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
9321496 9321496 PRJNA348537_S_NODE_1868_length_215_cov_14296.044444_g1822_i0 PRJNA348537 1868 215 14296.044444 30736.4955546 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.12e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1822 i0 100 18.8232558139535 41 0 19 0 1 41 375 415 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4047 76.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
11872100 11872100 PRJNA348537_S_NODE_1910_length_213_cov_14358.595506_g1864_i0 PRJNA348537 1910 213 14358.595506 30583.80842778 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 75 4e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1864 i0 100 18.3427230046948 40 0 19 0 174 213 414 375 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3907 75 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
13147114 13147114 PRJNA348537_S_NODE_1631_length_228_cov_13123.010363_g1585_i0 PRJNA348537 1631 228 13123.010363 29920.46362764 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.21e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1585 i0 100 17.5438596491228 41 0 18 0 188 228 415 375 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4000 76.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
13823891 13823891 PRJNA348537_S_NODE_2511_length_191_cov_16929.551282_g2465_i0 PRJNA348537 2511 191 16929.551282 32335.44294862 root 1 Root_unresolved Root_unresolved 73.1 1.26e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g2465 i0 100 22.3821989528796 39 0 20 0 1 39 375 413 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4275 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15098221 15098221 PRJNA348537_S_NODE_1352_length_250_cov_4.362791_g1306_i0 PRJNA348537 1352 250 4.362791 10.9069775 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 451 1.91e-122   NTclustered gi|573007512|gb|AY598619.2| 289596 g1306 i0 99.2 98.796 250 2 100 0 1 250 3243 2994 Pythium adhaerens strain CBS 520.74 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24699 451 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium adhaerens
15098230 15098230 PRJNA348537_S_NODE_2752_length_185_cov_3.306667_g2706_i0 PRJNA348537 2752 185 3.306667 6.11733395 root 1 Root_unresolved Root_unresolved 278 2.39e-70   NTclustered gi|2248513641|ref|NC_063810.1| 4795 g2706 i0 94.054 104.27027027027 185 7 100 3 1 185 5689 5509 Phytophthora megakarya isolate Pm2 mitochondrion, complete genome blastn 19290 279 0.996415770609319 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
16372976 16372976 PRJNA348537_S_NODE_1093_length_277_cov_34.202479_g1047_i0 PRJNA348537 1093 277 34.202479 94.74086683 root 1 Root_unresolved Root_unresolved 448 2.7799999999999996e-121   NTclustered gi|613433395|gb|KJ410683.1| 145522 g1047 i0 97.701 170.191335740072 261 4 94 2 18 277 66275 66016 Nannochloropsis oceanica strain LAMB0001 chloroplast, partial genome blastn 47143 448 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis oceanica
16372983 16372983 PRJNA348537_S_NODE_2753_length_185_cov_3.000000_g2707_i0 PRJNA348537 2753 185 3 5.55 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 342 8.369999999999999e-90   NTclustered gi|51235482|gb|AY598628.1| 82932 g2707 i0 100 100.005405405405 185 0 100 0 1 185 1796 1612 Pythium arrhenomanes strain CBS 324.62 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18501 342 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium arrhenomanes
16970851 16970851 PRJNA348537_S_NODE_1854_length_216_cov_14211.900552_g1808_i0 PRJNA348537 1854 216 14211.900552 30697.70519232 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 75 4.07e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1808 i0 100 18.1481481481481 40 0 19 0 177 216 414 375 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3920 75 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
18245073 18245073 PRJNA348537_S_NODE_1755_length_221_cov_13553.274194_g1709_i0 PRJNA348537 1755 221 13553.274194 29952.73596874 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.16e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1709 i0 100 19.1221719457014 41 0 19 0 1 41 375 415 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4226 76.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
18245078 18245078 PRJNA348537_S_NODE_3215_length_173_cov_9.173913_g3169_i0 PRJNA348537 3215 173 9.173913 15.87086949 Pythium monospermum 92964 SAR_Eukaryotes SAR_Eukaryotes 309 7.81e-80   NTclustered gi|33520250|gb|AY273995.1| 92964 g3169 i0 98.844 98.0520231213873 173 2 100 0 1 173 77 249 Pythium monospermum large subunit ribosomal RNA gene, partial sequence blastn 16963 309 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium monospermum
18245082 18245082 PRJNA348537_S_NODE_4135_length_157_cov_2.631148_g4089_i0 PRJNA348537 4135 157 2.631148 4.13090236 Sporochnus pedunculatus 112061 SAR_Eukaryotes SAR_Eukaryotes 73.1 9.94e-9   NTclustered gi|157411058|gb|EF990229.1| 112061 g4089 i0 87.5 0.407643312101911 64 7 40 1 2 64 1354 1417 Sporochnus pedunculatus large subunit ribosomal RNA gene, partial sequence blastn 64 73.1 1 Eukaryota Sar     Phaeophyceae Sporochnales Sporochnaceae Sporochnus Sporochnus pedunculatus
18921896 18921896 PRJNA348537_S_NODE_1935_length_212_cov_14660.932203_g1889_i0 PRJNA348537 1935 212 14660.932203 31081.17627036 root 1 Root_unresolved Root_unresolved 73.1 1.43e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g1889 i0 100 20.5518867924528 39 0 18 0 174 212 413 375 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4357 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
21472145 21472145 PRJNA348537_S_NODE_2717_length_186_cov_3.655629_g2671_i0 PRJNA348537 2717 186 3.655629 6.79946994 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 335 1.4099999999999996e-87   NTclustered gi|2832795190|gb|PQ465262.1| 88834 g2671 i0 99.457 99.258064516129 184 1 99 0 3 186 2589 2772 Pythium porphyrae isolate Bangia fuscopurpurea small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18462 335 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium porphyrae
23345413 23345413 PRJNA348537_S_NODE_2339_length_197_cov_15632.240741_g2293_i0 PRJNA348537 2339 197 15632.240741 30795.51425977 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 75 3.64e-9   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g2293 i0 100 19.9035532994924 40 0 20 0 158 197 414 375 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3921 75 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
24619664 24619664 PRJNA348537_S_NODE_2940_length_180_cov_3.193103_g2894_i0 PRJNA348537 2940 180 3.193103 5.7475854 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 279 6.43e-71   NTclustered gi|937408816|ref|NC_027966.1| 114742 g2894 i0 94.536 105.844444444444 183 7 100 1 1 180 11137 11319 Pythium insidiosum mitochondrial DNA, complete genome blastn 19052 279 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;