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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA348537" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA348537 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1668147 1668147 PRJNA348537_S_NODE_2722_length_186_cov_2.509934_g2676_i0 PRJNA348537 2722 186 2.509934 4.66847724 uncultured Naegleria 229031 Heterolobosea other_Eukaryota 344 2.34e-90   NTclustered gi|2206187049|gb|OM946712.1| 229031 g2676 i0 100 99.8172043010753 186 0 100 0 1 186 224 39 Uncultured Naegleria clone STP_A-OC-42 small subunit ribosomal RNA gene, partial sequence blastn 18566 344 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae   uncultured Naegleria
2345776 2345776 PRJNA348537_S_NODE_3222_length_173_cov_3.492754_g3176_i0 PRJNA348537 3222 173 3.492754 6.04246442 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 239 1.04e-58   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g3176 i0 98.519 98.7630057803468 135 2 78 0 22 156 5283 5149 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 17086 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
2345779 2345779 PRJNA348537_S_NODE_3822_length_162_cov_1.346457_g3776_i0 PRJNA348537 3822 162 1.346457 2.18126034 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 239 9.64e-59   NTclustered gi|440222388|gb|JX030056.1| 5659 g3776 i0 93.21 83.1604938271605 162 11 100 0 1 162 21 182 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 13472 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
8722987 8722987 PRJNA348537_S_NODE_3987_length_159_cov_2.596774_g3941_i0 PRJNA348537 3987 159 2.596774 4.12887066 Naegleria 5761 Heterolobosea other_Eukaryota 244 2.02e-60   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3941 i0 95.425 36.4276729559748 153 7 96 0 7 159 3951 4103 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 5792 246 0.991869918699187 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9321483 9321483 PRJNA348537_S_NODE_1028_length_285_cov_3.352000_g982_i0 PRJNA348537 1028 285 3.352 9.5532 Neobodo designis 312471 Euglenozoa other_Eukaryota 501 2.17e-137   NTclustered gi|33317834|gb|AF464896.1| 312471 g982 i0 99.281 125.754385964912 278 1 97 1 1 277 278 1 Bodo designis strain DH 18S small subunit ribosomal RNA gene, partial sequence blastn 35840 501 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
13147131 13147131 PRJNA348537_S_NODE_751_length_324_cov_6.401384_g705_i0 PRJNA348537 751 324 6.401384 20.74048416 Neobodo designis 312471 Euglenozoa other_Eukaryota 577 4.0599999999999986e-160   NTclustered gi|1996609219|gb|MW694338.1| 312471 g705 i0 100 87.9537037037037 312 0 96 0 3 314 868 557 Neobodo designis isolate G409 small subunit ribosomal RNA gene, partial sequence blastn 28497 577 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
19519296 19519296 PRJNA348537_S_NODE_396_length_429_cov_16.616751_g350_i0 PRJNA348537 396 429 16.616751 71.28586179 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 566 1.2e-156   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g350 i0 91.08 139.065268065268 426 27 97 9 1 416 4378 4802 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 59659 566 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
20196504 20196504 PRJNA348537_S_NODE_4376_length_154_cov_2.411765_g4330_i0 PRJNA348537 4376 154 2.411765 3.7141181 Naegleria 5761 Heterolobosea other_Eukaryota 263 5.36e-66   NTclustered gi|2210333082|gb|ON036165.1| 36335 g4330 i0 100 92.7987012987013 142 0 92 0 1 142 57 198 Naegleria jamiesoni isolate SG-07 internal transcribed spacer region, partial sequence blastn 14291 263 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
20794884 20794884 PRJNA348537_S_NODE_4277_length_155_cov_2.583333_g4231_i0 PRJNA348537 4277 155 2.583333 4.00416615 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 259 7e-65   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4231 i0 96.774 13.0064516129032 155 5 100 0 1 155 2090 2244 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2016 259 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25296644 25296644 PRJNA348537_S_NODE_1840_length_217_cov_7.736264_g1794_i0 PRJNA348537 1840 217 7.736264 16.78769288 Trypanosoma 5690 Euglenozoa other_Eukaryota 344 2.8199999999999993e-90   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g1794 i0 98.462 117.391705069124 195 3 90 0 22 216 68 262 T.cruzi S3 ribosomal RNA gene blastn 25474 344 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
25296645 25296645 PRJNA348537_S_NODE_2060_length_207_cov_25.994186_g2014_i0 PRJNA348537 2060 207 25.994186 53.80796502 Trypanosoma 5690 Euglenozoa other_Eukaryota 233 6.029999999999999e-57   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g2014 i0 89.247 110.985507246377 186 20 90 0 1 186 253 68 T.cruzi S3 ribosomal RNA gene blastn 22974 233 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;