contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA345071" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393456 | 393456 | PRJNA345071_P_NODE_6521_length_266_cov_1.616580_g6481_i0 | PRJNA345071 | 6521 | 266 | 1.61658 | 4.3001028 | Rossellomorea sp. y25 | 3118174 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|2689064024|gb|CP145886.1| | 3118174 | g6481 | i0 | 100 | 0.105263157894737 | 28 | 0 | 11 | 0 | 100 | 127 | 643150 | 643177 | Rossellomorea sp. y25 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Rossellomorea | Rossellomorea sp. y25 | ||
| 1070359 | 1070359 | PRJNA345071_P_NODE_10421_length_243_cov_0.917647_g10381_i0 | PRJNA345071 | 10421 | 243 | 0.917647 | 2.22988221 | Bacillales | 1385 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g10381 | i0 | 100 | 519.864197530864 | 243 | 0 | 100 | 0 | 1 | 243 | 748827 | 748585 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 126327 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 5496933 | 5496933 | PRJNA345071_P_NODE_2685_length_358_cov_2.908772_g2645_i0 | PRJNA345071 | 2685 | 358 | 2.908772 | 10.41340376 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 610 | 4.46e-170 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g2645 | i0 | 97.479 | 152.751396648045 | 357 | 9 | 99 | 0 | 1 | 357 | 121133 | 121489 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 54685 | 610 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 7448253 | 7448253 | PRJNA345071_P_NODE_11086_length_234_cov_3.366460_g11046_i0 | PRJNA345071 | 11086 | 234 | 3.36646 | 7.8775164 | Lactobacillus | 1578 | Bacteria | Bacteria | 431 | 2.3e-116 | NTclustered | gi|1721134184|emb|LR698986.1| | 1587 | g11046 | i0 | 100 | 417.388888888889 | 233 | 0 | 99 | 0 | 2 | 234 | 981333 | 981565 | Lactobacillus helveticus isolate MGYG-HGUT-02384 genome assembly, chromosome: 1 | blastn | 97669 | 431 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus helveticus | ||
| 7448282 | 7448282 | PRJNA345071_P_NODE_9306_length_247_cov_0.896552_g9266_i0 | PRJNA345071 | 9306 | 247 | 0.896552 | 2.21448344 | root | 1 | Root_unresolved | Root_unresolved | 457 | 4.05e-124 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g9266 | i0 | 100 | 171 | 247 | 0 | 100 | 0 | 1 | 247 | 1370 | 1124 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 42237 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 11273605 | 11273605 | PRJNA345071_P_NODE_7629_length_253_cov_0.866667_g7589_i0 | PRJNA345071 | 7629 | 253 | 0.866667 | 2.19266751 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1611638273|gb|CP033616.1| | 1590 | g7589 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 146403 | 146655 | Lactiplantibacillus plantarum strain J26 chromosome, complete genome | blastn | 25300 | 468 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 16372931 | 16372931 | PRJNA345071_P_NODE_10193_length_244_cov_0.912281_g10153_i0 | PRJNA345071 | 10193 | 244 | 0.912281 | 2.22596564 | Bacillati | 1783272 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1663088249|gb|CP039160.1| | 1280 | g10153 | i0 | 100 | 53.9877049180328 | 244 | 0 | 100 | 0 | 1 | 244 | 2779085 | 2779328 | Staphylococcus aureus strain Lr6 chromosome, complete genome | blastn | 13173 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 18244895 | 18244895 | PRJNA345071_P_NODE_3455_length_329_cov_3.535156_g3415_i0 | PRJNA345071 | 3455 | 329 | 3.535156 | 11.63066324 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 603 | 6.819999999999999e-168 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g3415 | i0 | 100 | 318.127659574468 | 326 | 0 | 99 | 0 | 3 | 328 | 122210 | 121885 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 104664 | 603 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 18921871 | 18921871 | PRJNA345071_P_NODE_8475_length_250_cov_0.881356_g8435_i0 | PRJNA345071 | 8475 | 250 | 0.881356 | 2.20339 | Anaerococcus | 165779 | Bacteria | Bacteria | 457 | 4.1099999999999985e-124 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g8435 | i0 | 99.6 | 604.6 | 250 | 1 | 100 | 0 | 1 | 250 | 123153 | 122904 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 151150 | 457 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 19519265 | 19519265 | PRJNA345071_P_NODE_9596_length_246_cov_0.901734_g9556_i0 | PRJNA345071 | 9596 | 246 | 0.901734 | 2.21826564 | Candidatus Lachnocurva vaginae | 699240 | Bacteria | Bacteria | 377 | 3.2300000000000003e-100 | NTclustered | gi|1820025701|gb|CP049781.1| | 699240 | g9556 | i0 | 94.65 | 0.98780487804878 | 243 | 13 | 99 | 0 | 3 | 245 | 588851 | 588609 | MAG: Candidatus Lachnocurva vaginae isolate UAB071 chromosome, complete genome | blastn | 243 | 377 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Candidatus Lachnocurva | Candidatus Lachnocurva vaginae | ||
| 20794756 | 20794756 | PRJNA345071_P_NODE_4837_length_293_cov_2.031818_g4797_i0 | PRJNA345071 | 4837 | 293 | 2.031818 | 5.95322674 | Anaerococcus sp. WGS1596 | 3366806 | Bacteria | Bacteria | 492 | 1.35e-134 | NTclustered | gi|2831295055|gb|CP170995.1| | 3366806 | g4797 | i0 | 96.939 | 158.21843003413 | 294 | 8 | 100 | 1 | 1 | 293 | 481381 | 481674 | Anaerococcus sp. WGS1596 chromosome, complete genome | blastn | 46358 | 492 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. WGS1596 | ||
| 21472120 | 21472120 | PRJNA345071_P_NODE_6857_length_262_cov_1.449735_g6817_i0 | PRJNA345071 | 6857 | 262 | 1.449735 | 3.7983057 | Streptococcus | 1301 | Bacteria | Bacteria | 484 | 1.99e-132 | NTclustered | gi|1403375826|emb|LS483375.1| | 1302 | g6817 | i0 | 100 | 327 | 262 | 0 | 100 | 0 | 1 | 262 | 625483 | 625222 | Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1 | blastn | 85674 | 484 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii | ||
| 21472121 | 21472121 | PRJNA345071_P_NODE_7197_length_257_cov_3.201087_g7157_i0 | PRJNA345071 | 7197 | 257 | 3.201087 | 8.22679359 | Streptococcus | 1301 | Bacteria | Bacteria | 475 | 1.1699999999999999e-129 | NTclustered | gi|1686100227|gb|MK330575.1| | 28037 | g7157 | i0 | 100 | 323.906614785992 | 257 | 0 | 100 | 0 | 1 | 257 | 2041 | 1785 | Streptococcus mitis strain PL429 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 83244 | 475 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 23345169 | 23345169 | PRJNA345071_P_NODE_10959_length_239_cov_3.987952_g10919_i0 | PRJNA345071 | 10959 | 239 | 3.987952 | 9.53120528 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 403 | 5.15e-108 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g10919 | i0 | 97.071 | 593.983263598326 | 239 | 7 | 100 | 0 | 1 | 239 | 123671 | 123433 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 141962 | 403 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 24022186 | 24022186 | PRJNA345071_P_NODE_8139_length_251_cov_0.876404_g8099_i0 | PRJNA345071 | 8139 | 251 | 0.876404 | 2.19977404 | Enterococcus | 1350 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2437787960|gb|CP116571.1| | 1351 | g8099 | i0 | 100 | 100 | 251 | 0 | 100 | 0 | 1 | 251 | 1588216 | 1587966 | Enterococcus faecalis strain K190-1 chromosome, complete genome | blastn | 25100 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 24619602 | 24619602 | PRJNA345071_P_NODE_7660_length_253_cov_0.866667_g7620_i0 | PRJNA345071 | 7660 | 253 | 0.866667 | 2.19266751 | Finegoldia magna | 1260 | Bacteria | Bacteria | 379 | 9.269999999999998e-101 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g7620 | i0 | 93.676 | 3.02371541501976 | 253 | 16 | 100 | 0 | 1 | 253 | 935590 | 935842 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 765 | 379 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;