RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA345071" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA345071 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2345731 2345731 PRJNA345071_P_NODE_22_length_1844_cov_504.219085_g16_i0 PRJNA345071 22 1844 504.219085 9297.7999274 Zebrafish influenza B-like virus RQ01 Viruses Viruses 900 0   NTclustered gi|4760940|gb|AF100359.1|AF100359 RQ01 g16 i0 77.302 84.337852494577 1564 332 84 19 37 1590 1743 193 Influenza B virus B/Victoria/2/87 segment 5 nucleoprotein (NP) gene, complete cds blastn 155519 902 0.997782705099778 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
5497048 5497048 PRJNA345071_P_NODE_7365_length_255_cov_2.120879_g7325_i0 PRJNA345071 7365 255 2.120879 5.40824145 Trichovirus chloropersicae 3432984 Viruses Viruses 388 1.5499999999999998e-103   NTclustered gi|1479557639|gb|MH084696.1| 2358294 g7325 i0 94.118 20.5647058823529 255 15 100 0 1 255 5664 5918 Peach chlorotic leaf spot virus isolate RP19-2, complete genome blastn 5244 388 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae
7448274 7448274 PRJNA345071_P_NODE_6_length_2383_cov_21.471429_g3_i0 PRJNA345071 6 2383 21.471429 511.66415307 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1711 0   NTclustered gi|2070683497|gb|MZ603947.1| RQ01 g3 i0 79.84 99.0709190096517 2371 456 99 22 4 2363 2 2361 Influenza B virus (B/USA/5/2017) segment 2 polymerase PB2 (PB2) gene, complete cds blastn 236086 1711 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
8046579 8046579 PRJNA345071_P_NODE_2507_length_368_cov_1.359322_g2467_i0 PRJNA345071 2507 368 1.359322 5.00230496 Great lobelia partitivirus 2933144 Viruses Viruses 375 1.8299999999999998e-99   NTclustered gi|2381814345|emb|OX380358.1| 2933144 g2467 i0 85.674 0.967391304347826 356 51 97 0 2 357 210 565 Great lobelia partitivirus RNA2 blastn 356 375 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Great lobelia partitivirus
8722949 8722949 PRJNA345071_P_NODE_7_length_2357_cov_14.318301_g4_i0 PRJNA345071 7 2357 14.318301 337.48235457 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1628 0   NTclustered gi|2054205231|gb|MZ401397.1| RQ01 g4 i0 79.504 96.7293169282987 2298 463 97 8 62 2355 2295 2 Influenza B virus (B/USA/762910_Segment_1/2021) segment 1 polymerase PB1 (PB1) gene, complete cds blastn 227991 1628 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
11273616 11273616 PRJNA345071_P_NODE_9_length_2260_cov_14.909465_g6_i0 PRJNA345071 9 2260 14.909465 336.953909 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1448 0   NTclustered gi|1128385509|gb|CY211229.1| RQ01 g6 i0 78.662 97.1092920353982 2198 455 97 14 19 2209 2 2192 Influenza B virus (B/Florida/91/2016) polymerase PA (PA) gene, complete cds blastn 219467 1448 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
12548899 12548899 PRJNA345071_P_NODE_110_length_1179_cov_515.866184_g97_i0 PRJNA345071 110 1179 515.866184 6082.06230936 Zebrafish influenza B-like virus RQ01 Viruses Viruses 641 5.609999999999999e-179   NTclustered gi|2449947533|gb|OQ535360.1| RQ01 g97 i0 80.546 71.4758269720102 843 156 71 8 6 844 1 839 Influenza B virus (B/USA/8B1/2011) segment 7 matrix protein 1 (M1) and BM2 protein (BM2) genes, complete cds blastn 84270 641 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
14422036 14422036 PRJNA345071_P_NODE_152_length_1090_cov_195.870206_g133_i0 PRJNA345071 152 1090 195.870206 2134.9852454 Zebrafish influenza B-like virus RQ01 Viruses Viruses 468 9.29e-127   NTclustered gi|2413738156|gb|OQ034364.1| RQ01 g133 i0 74.886 79.2403669724771 1099 240 99 32 1 1085 1077 1 Influenza B virus (B/Great Lakes/1739/1954) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 86372 468 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
15696053 15696053 PRJNA345071_P_NODE_6393_length_268_cov_1.610256_g6353_i0 PRJNA345071 6393 268 1.610256 4.31548608 Trichovirus chloropersicae 3432984 Viruses Viruses 424 4.5099999999999996e-114   NTclustered gi|1479557639|gb|MH084696.1| 2358294 g6353 i0 95.149 46.9850746268657 268 13 100 0 1 268 6966 6699 Peach chlorotic leaf spot virus isolate RP19-2, complete genome blastn 12592 424 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus chloropersicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;