RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA342843" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 6 ✖

bioproject 1

  • PRJNA342843 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10596837 10596837 PRJNA342843_S_NODE_7229_length_241_cov_2.800000_g7079_i0 PRJNA342843 7229 241 2.8 6.748 Inoviridae sp. 2219103 Viruses Viruses 394 3.13e-105   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g7079 i0 96.25 2.97510373443983 240 9 99 0 1 240 4428 4189 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 717 394 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14421750 14421750 PRJNA342843_S_NODE_4272_length_337_cov_1.925676_g4122_i0 PRJNA342843 4272 337 1.925676 6.48952812 Inoviridae sp. 2219103 Viruses Viruses 479 1.2299999999999999e-130   NTclustered gi|2056792906|tpg|BK057154.1| 2219103 g4122 i0 92.285 5.73590504451039 337 26 100 0 1 337 4995 5331 MAG TPA_asm: Inoviridae sp. isolate ct3qb1, partial genome blastn 1933 479 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
15695730 15695730 PRJNA342843_S_NODE_6653_length_254_cov_3.699531_g6503_i0 PRJNA342843 6653 254 3.699531 9.39680874 Inoviridae sp. 2219103 Viruses Viruses 387 5.569999999999998e-103   NTclustered gi|2906148673|gb|PQ646408.1| 2219103 g6503 i0 94.422 7.11023622047244 251 14 99 0 4 254 787 537 MAG: Inoviridae sp. isolate k127_4036430 genomic sequence blastn 1806 387 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18244769 18244769 PRJNA342843_S_NODE_9115_length_208_cov_3.065868_g8965_i0 PRJNA342843 9115 208 3.065868 6.37700544 Inoviridae sp. 2219103 Viruses Viruses 324 3.5e-84   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g8965 i0 94.712 5.41826923076923 208 11 100 0 1 208 3994 4201 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 1127 324 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19518836 19518836 PRJNA342843_S_NODE_4856_length_310_cov_3.501859_g4706_i0 PRJNA342843 4856 310 3.501859 10.8557629 Inoviridae sp. 2219103 Viruses Viruses 364 3.269999999999999e-96   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g4706 i0 88.525 4.1258064516129 305 30 98 5 1 304 2518 2218 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 1279 364 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
22069556 22069556 PRJNA342843_S_NODE_6198_length_265_cov_2.500000_g6048_i0 PRJNA342843 6198 265 2.5 6.625 Inoviridae sp. 2219103 Viruses Viruses 113 1.1e-20   NTclustered gi|2906151747|gb|PQ646607.1| 2219103 g6048 i0 77.778 0.781132075471698 207 31 75 11 1 200 521 323 MAG: Inoviridae sp. isolate k127_1412576 genomic sequence blastn 207 113 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;