RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
392236 392236 PRJNA340009_P_NODE_42081_length_197_cov_1.378378_g41774_i0 PRJNA340009 42081 197 1.378378 2.71540466 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 110 9.98e-20   NTclustered gi|2107935461|gb|CP070802.1| 2052148 g41774 i0 89.655 38.4619289340102 87 7 44 2 100 185 200492 200407 MAG: candidate division WOR-3 bacterium isolate bin1351 chromosome blastn 7577 110 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
16372594 16372594 PRJNA340009_P_NODE_35953_length_210_cov_3.409938_g35646_i0 PRJNA340009 35953 210 3.409938 7.1608698 Bacteria 2 Bacteria Bacteria 113 8.33e-21   NTclustered gi|2108331183|gb|CP070664.1| 2052148 g35646 i0 88.421 125.642857142857 95 9 45 2 61 154 427767 427860 MAG: candidate division WOR-3 bacterium isolate bin77 chromosome blastn 26385 113 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;