RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9319920 9319920 PRJNA340009_P_NODE_16448_length_294_cov_1.902041_g16141_i0 PRJNA340009 16448 294 1.902041 5.59200054 Entomophaga aulicae 39303 Fungi Fungi 512 1.04e-140   NTclustered gi|1373048|gb|U35394.1|EAU35394 39303 g16141 i0 99.296 5.47959183673469 284 0 97 1 11 294 4555 4836 Entomophaga aulicae 18S, ITS-1, 5.8S, ITS-2, and 25S ribosomal RNA genes blastn 1611 512 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophaga Entomophaga aulicae
14420733 14420733 PRJNA340009_P_NODE_20472_length_267_cov_2.834862_g20165_i0 PRJNA340009 20472 267 2.834862 7.56908154 Harpella melusinae 370264 Fungi Fungi 110 1.43e-19   NTclustered gi|666440445|gb|KF848904.1| 370264 g20165 i0 84.874 19.6741573033708 119 7 44 6 150 267 2851 2743 Harpella melusinae 28S ribosomal RNA gene, partial sequence blastn 5253 110 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Harpella Harpella melusinae
14421162 14421162 PRJNA340009_P_NODE_60752_length_168_cov_1.714286_g60445_i0 PRJNA340009 60752 168 1.714286 2.88000048 Kickxella alabastrina 61397 Fungi Fungi 102 1.38e-17   NTclustered gi|2323997718|ref|XM_051533246.1| 61397 g60445 i0 81.102 1.60714285714286 127 24 76 0 26 152 1110 1236 Kickxella alabastrina pseudouridine synthase (BX661DRAFT_153), mRNA blastn 270 102 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;