contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392124 | 392124 | PRJNA340009_P_NODE_32141_length_221_cov_0.819767_g31834_i0 | PRJNA340009 | 32141 | 221 | 0.819767 | 1.81168507 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 145 | 3.14e-30 | NTclustered | gi|2795058078|ref|XM_067944971.1| | 4785 | g31834 | i0 | 81.714 | 1.57918552036199 | 175 | 30 | 79 | 2 | 1 | 174 | 3813 | 3986 | Phytophthora cinnamomi structural maintenance of chromosomes protein (IUM83_19902), partial mRNA | blastn | 349 | 145 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 5496240 | 5496240 | PRJNA340009_P_NODE_79925_length_154_cov_2.914286_g79618_i0 | PRJNA340009 | 79925 | 154 | 2.914286 | 4.48800044 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 132 | 1.58e-26 | NTclustered | gi|1111669769|ref|NC_032052.1| | 157072 | g79618 | i0 | 83.571 | 6.61038961038961 | 140 | 23 | 91 | 0 | 5 | 144 | 10733 | 10872 | Aphanomyces invadans isolate NJM9701 mitochondrion, complete genome | blastn | 1018 | 132 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 8045297 | 8045297 | PRJNA340009_P_NODE_30667_length_225_cov_1.420455_g30360_i0 | PRJNA340009 | 30667 | 225 | 1.420455 | 3.19602375 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 176 | 1.14e-39 | NTclustered | gi|1111669769|ref|NC_032052.1| | 157072 | g30360 | i0 | 82.99 | 62 | 194 | 33 | 88 | 0 | 4 | 197 | 5998 | 5805 | Aphanomyces invadans isolate NJM9701 mitochondrion, complete genome | blastn | 13950 | 176 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 8722518 | 8722518 | PRJNA340009_P_NODE_20147_length_269_cov_2.086364_g19840_i0 | PRJNA340009 | 20147 | 269 | 2.086364 | 5.61231916 | root | 1 | Root_unresolved | Root_unresolved | 483 | 7.369999999999998e-132 | NTclustered | gi|166044518|emb|CU367427.1| | 100861 | g19840 | i0 | 99.251 | 18.817843866171 | 267 | 2 | 99 | 0 | 1 | 267 | 536 | 802 | Aphanomyces euteiches cDNA | blastn | 5062 | 483 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 9998312 | 9998312 | PRJNA340009_P_NODE_69288_length_164_cov_0.886957_g68981_i0 | PRJNA340009 | 69288 | 164 | 0.886957 | 1.45460948 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.59e-76 | NTclustered | gi|166046539|emb|CU367656.1| | 100861 | g68981 | i0 | 99.39 | 99.8658536585366 | 164 | 1 | 100 | 0 | 1 | 164 | 515 | 352 | Aphanomyces euteiches cDNA | blastn | 16378 | 298 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 10595893 | 10595893 | PRJNA340009_P_NODE_3969_length_524_cov_6.880000_g3669_i0 | PRJNA340009 | 3969 | 524 | 6.88 | 36.0512 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 281 | 6.02e-71 | NTclustered | gi|698807229|ref|XM_009838342.1| | 112090 | g3669 | i0 | 80.533 | 64.5152671755725 | 375 | 65 | 70 | 4 | 23 | 390 | 68 | 441 | Aphanomyces astaci polyubiquitin mRNA | blastn | 33806 | 281 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 15694693 | 15694693 | PRJNA340009_P_NODE_29193_length_229_cov_73.461111_g28886_i0 | PRJNA340009 | 29193 | 229 | 73.461111 | 168.22594419 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 388 | 1.3699999999999998e-103 | NTclustered | gi|1111669722|ref|NC_032051.1| | 112090 | g28886 | i0 | 99.531 | 103.248908296943 | 213 | 1 | 93 | 0 | 17 | 229 | 3749 | 3961 | Aphanomyces astaci isolate AP03 mitochondrion, complete genome | blastn | 23644 | 388 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 22746840 | 22746840 | PRJNA340009_P_NODE_23258_length_253_cov_1.411765_g22951_i0 | PRJNA340009 | 23258 | 253 | 1.411765 | 3.57176545 | root | 1 | Root_unresolved | Root_unresolved | 337 | 5.659999999999998e-88 | NTclustered | gi|166046496|emb|CU367613.1| | 100861 | g22951 | i0 | 94.931 | 89.802371541502 | 217 | 8 | 85 | 3 | 38 | 253 | 329 | 115 | Aphanomyces euteiches cDNA | blastn | 22720 | 337 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 24021677 | 24021677 | PRJNA340009_P_NODE_13199_length_322_cov_24.179487_g12892_i0 | PRJNA340009 | 13199 | 322 | 24.179487 | 77.85794814 | root | 1 | Root_unresolved | Root_unresolved | 496 | 1.16e-135 | NTclustered | gi|166046794|emb|CU367369.1| | 100861 | g12892 | i0 | 100 | 83.2546583850932 | 268 | 0 | 83 | 0 | 22 | 289 | 792 | 525 | Aphanomyces euteiches cDNA | blastn | 26808 | 496 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 24618193 | 24618193 | PRJNA340009_P_NODE_29360_length_229_cov_1.766667_g29053_i0 | PRJNA340009 | 29360 | 229 | 1.766667 | 4.04566743 | Achlya bisexualis | 4766 | SAR_Eukaryotes | SAR_Eukaryotes | 257 | 4.03e-64 | NTclustered | gi|2289|emb|X59936.1| | 4766 | g29053 | i0 | 86.9 | 96.0087336244542 | 229 | 30 | 100 | 0 | 1 | 229 | 237 | 9 | A.bisexualis gene for actin | blastn | 21986 | 257 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya bisexualis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;