RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9320579 9320579 PRJNA340009_P_NODE_75668_length_161_cov_1.750000_g75361_i0 PRJNA340009 75668 161 1.75 2.8175 uncultured Glomeromycotina 241622 Fungi Fungi 82.4 1.71e-11   NTclustered gi|345652255|gb|HQ895802.2| 241622 g75361 i0 85.897 4.83850931677019 78 10 48 1 61 137 443 366 Uncultured Glomeromycota clone G11_6 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 779 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
10596302 10596302 PRJNA340009_P_NODE_78729_length_157_cov_8.629630_g78422_i0 PRJNA340009 78729 157 8.62963 13.5485191 Cokeromyces recurvatus 90255 Fungi Fungi 187 3.3999999999999993e-43   NTclustered gi|2324050422|ref|XM_051524463.1| 90255 g78422 i0 89.262 1.70063694267516 149 16 95 0 5 153 1818 1670 Cokeromyces recurvatus ABC-2 type transporter-domain-containing protein (BX663DRAFT_482945), partial mRNA blastn 267 187 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
13145986 13145986 PRJNA340009_P_NODE_57191_length_173_cov_1.532258_g56884_i0 PRJNA340009 57191 173 1.532258 2.65080634 Lichtheimia ornata 688661 Fungi Fungi 54.7 0.004   NTclustered gi|2553555089|ref|XM_058481796.1| 688661 g56884 i0 96.875 0.832369942196532 32 1 18 0 8 39 341 372 Lichtheimia ornata uncharacterized protein (O0I10_001704), partial mRNA blastn 144 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
13823558 13823558 PRJNA340009_P_NODE_56491_length_174_cov_1.480000_g56184_i0 PRJNA340009 56491 174 1.48 2.5752 Eukaryota 2759 Fungi Fungi 111 2.38e-20   NTclustered gi|2323709600|ref|XM_051571450.1| 64574 g56184 i0 78.788 20.7873563218391 165 35 95 0 10 174 957 793 Radiomyces spectabilis H/ACA ribonucleoprotein complex subunit 4 (BYT42DRAFT_611014), partial mRNA blastn 3617 111 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
14421330 14421330 PRJNA340009_P_NODE_7552_length_405_cov_1.688202_g7245_i0 PRJNA340009 7552 405 1.688202 6.8372181 Rhizopus delemar 936053 Fungi Fungi 198 4.72e-46   NTclustered gi|2797464637|ref|XM_067662714.1| 246409 g7245 i0 80.682 60.9283950617284 264 43 64 8 84 343 96 355 Rhizopus delemar RA 99-880 histone H2B (RO3G_08124), partial mRNA blastn 24676 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
23344186 23344186 PRJNA340009_P_NODE_47439_length_187_cov_3.673913_g47132_i0 PRJNA340009 47439 187 3.673913 6.87021731 uncultured Paraglomus 231236 Fungi Fungi 171 4.24e-38   NTclustered gi|583967923|gb|KF849630.1| 231236 g47132 i0 93.103 100.561497326203 116 8 99 0 2 117 1162 1047 Uncultured Paraglomus clone AM150 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18805 171 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales     uncultured Paraglomus
23344545 23344545 PRJNA340009_P_NODE_80019_length_154_cov_2.628571_g79712_i0 PRJNA340009 80019 154 2.628571 4.04799934 Lobosporangium transversale 64571 Fungi Fungi 60.2 7.55e-5   NTclustered gi|1227134910|ref|XM_022023508.1| 64571 g79712 i0 97.143 0.779220779220779 35 1 23 0 18 52 1629 1663 Lobosporangium transversale hypothetical protein (BCR41DRAFT_349662), mRNA blastn 120 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
25296375 25296375 PRJNA340009_P_NODE_69920_length_164_cov_0.886957_g69613_i0 PRJNA340009 69920 164 0.886957 1.45460948 Opisthokonta 33154 Fungi Fungi 246 5.8499999999999995e-61   NTclustered gi|82398553|gb|DQ273817.1| 4846 g69613 i0 93.491 101.231707317073 169 5 100 6 1 164 1778 1611 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 16602 246 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;