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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1070209 1070209 PRJNA340009_P_NODE_9681_length_366_cov_27.637224_g9374_i0 PRJNA340009 9681 366 27.637224 101.15223984 Naegleria 5761 Heterolobosea other_Eukaryota 676 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g9374 i0 100 28.8087431693989 366 0 100 0 1 366 5435 5800 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 10544 676 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2943063 2943063 PRJNA340009_P_NODE_60703_length_168_cov_2.016807_g60396_i0 PRJNA340009 60703 168 2.016807 3.38823576 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 270 3.5799999999999998e-68   NTclustered gi|11466174|ref|NC_002573.1| 5762 g60396 i0 95.833 1 168 6 100 1 1 168 5364 5530 Naegleria gruberi mitochondrion, complete genome blastn 168 270 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2943101 2943101 PRJNA340009_P_NODE_64723_length_166_cov_0.871795_g64416_i0 PRJNA340009 64723 166 0.871795 1.4471797 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 224 2.7799999999999995e-54   NTclustered gi|290984333|ref|XM_002674836.1| 5762 g64416 i0 90.964 1 166 15 100 0 1 166 342 507 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_69948), partial mRNA blastn 166 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6769736 6769736 PRJNA340009_P_NODE_35766_length_211_cov_1.259259_g35459_i0 PRJNA340009 35766 211 1.259259 2.65703649 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 346 7.59e-91   NTclustered gi|11466174|ref|NC_002573.1| 5762 g35459 i0 96.209 1 211 8 100 0 1 211 6674 6464 Naegleria gruberi mitochondrion, complete genome blastn 211 346 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6769896 6769896 PRJNA340009_P_NODE_48806_length_185_cov_2.250000_g48499_i0 PRJNA340009 48806 185 2.25 4.1625 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 292 8.55e-75   NTclustered gi|11466174|ref|NC_002573.1| 5762 g48499 i0 95.135 2.48108108108108 185 9 100 0 1 185 26059 26243 Naegleria gruberi mitochondrion, complete genome blastn 459 292 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9320554 9320554 PRJNA340009_P_NODE_73168_length_162_cov_1.805310_g72861_i0 PRJNA340009 73168 162 1.80531 2.9246022 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 268 1.23e-67   NTclustered gi|290988312|ref|XM_002676820.1| 5762 g72861 i0 96.875 0.987654320987654 160 5 99 0 1 160 1465 1306 Naegleria gruberi phosphatidylserine decarboxylase (NAEGRDRAFT_79922), partial mRNA blastn 160 268 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10596097 10596097 PRJNA340009_P_NODE_59809_length_169_cov_3.366667_g59502_i0 PRJNA340009 59809 169 3.366667 5.68966723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 254 3.6e-63   NTclustered gi|290997254|ref|XM_002681151.1| 5762 g59502 i0 94.012 1.79881656804734 167 10 99 0 1 167 825 659 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_44329), partial mRNA blastn 304 254 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11273247 11273247 PRJNA340009_P_NODE_42689_length_196_cov_1.040816_g42382_i0 PRJNA340009 42689 196 1.040816 2.03999936 Naegleria 5761 Heterolobosea other_Eukaryota 363 6.899999999999998e-96   NTclustered gi|14211957|gb|AY033615.1| 160656 g42382 i0 100 66.4948979591837 196 0 100 0 1 196 391 196 Naegleria sp. PNML internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13033 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp. PNML
11870775 11870775 PRJNA340009_P_NODE_37750_length_206_cov_2.273885_g37443_i0 PRJNA340009 37750 206 2.273885 4.6842031 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 171 4.76e-38   NTclustered gi|290980170|ref|XM_002672760.1| 5762 g37443 i0 88.194 0.699029126213592 144 15 69 2 59 201 62 204 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_72112), partial mRNA blastn 144 171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13146115 13146115 PRJNA340009_P_NODE_68731_length_164_cov_0.886957_g68424_i0 PRJNA340009 68731 164 0.886957 1.45460948 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 211 2.13e-50   NTclustered gi|11466174|ref|NC_002573.1| 5762 g68424 i0 89.82 1.01829268292683 167 14 100 3 1 164 46717 46551 Naegleria gruberi mitochondrion, complete genome blastn 167 211 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13823357 13823357 PRJNA340009_P_NODE_12771_length_327_cov_3.187050_g12464_i0 PRJNA340009 12771 327 3.18705 10.4216535 Naegleria 5761 Heterolobosea other_Eukaryota 593 4.0699999999999987e-165   NTclustered gi|38606345|gb|AY376153.1| 5762 g12464 i0 99.388 39.2324159021407 327 2 100 0 1 327 348 674 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 12829 593 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14421345 14421345 PRJNA340009_P_NODE_7712_length_401_cov_10.394886_g7405_i0 PRJNA340009 7712 401 10.394886 41.68349286 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 161 6.119999999999998e-35   NTclustered gi|2119430834|ref|XM_044702227.1| 5763 g7405 i0 87.234 0.673316708229426 141 18 35 0 3 143 424 284 Naegleria fowleri uncharacterized protein (FDP41_011780), partial mRNA blastn 270 161 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
15694509 15694509 PRJNA340009_P_NODE_14293_length_312_cov_3.391635_g13986_i0 PRJNA340009 14293 312 3.391635 10.5819012 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 532 8.549999999999998e-147   NTclustered gi|38606344|gb|AY376152.1| 51634 g13986 i0 97.436 37.6153846153846 312 8 100 0 1 312 907 1218 Naegleria australiensis isolate 7857 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 11736 532 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
16969720 16969720 PRJNA340009_P_NODE_53494_length_178_cov_1.581395_g53187_i0 PRJNA340009 53494 178 1.581395 2.8148831 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 279 6.35e-71   NTclustered gi|291001504|ref|XM_002683273.1| 5762 g53187 i0 94.944 1 178 9 100 0 1 178 1088 911 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61657), partial mRNA blastn 178 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16969862 16969862 PRJNA340009_P_NODE_67594_length_165_cov_0.879310_g67287_i0 PRJNA340009 67594 165 0.87931 1.4508615 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 217 4.619999999999999e-52   NTclustered gi|290976843|ref|XM_002671103.1| 5762 g67287 i0 90.303 1 165 16 100 0 1 165 1720 1556 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_53116), partial mRNA blastn 165 217 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16969868 16969868 PRJNA340009_P_NODE_68334_length_164_cov_1.773913_g68027_i0 PRJNA340009 68334 164 1.773913 2.90921732 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 248 1.63e-61   NTclustered gi|290984838|ref|XM_002675088.1| 5762 g68027 i0 93.902 1 164 10 100 0 1 164 533 370 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_69786), partial mRNA blastn 164 248 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18244104 18244104 PRJNA340009_P_NODE_71915_length_163_cov_0.894737_g71608_i0 PRJNA340009 71915 163 0.894737 1.45842131 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 230 5.8499999999999985e-56   NTclustered gi|290999209|ref|XM_002682127.1| 5762 g71608 i0 92.025 15.0429447852761 163 13 100 0 1 163 865 1027 Naegleria gruberi aminotransferase (NAEGRDRAFT_82452), mRNA blastn 2452 230 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19518263 19518263 PRJNA340009_P_NODE_64076_length_166_cov_1.162393_g63769_i0 PRJNA340009 64076 166 1.162393 1.92957238 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 302 1.2500000000000001e-77   NTclustered gi|11466174|ref|NC_002573.1| 5762 g63769 i0 99.398 154.927710843373 166 1 100 0 1 166 789 954 Naegleria gruberi mitochondrion, complete genome blastn 25718 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20793630 20793630 PRJNA340009_P_NODE_4337_length_508_cov_2.997821_g4035_i0 PRJNA340009 4337 508 2.997821 15.22893068 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 845 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g4035 i0 96.654 11.0334645669291 508 17 100 0 1 508 211 718 Naegleria gruberi mitochondrion, complete genome blastn 5605 845 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21471705 21471705 PRJNA340009_P_NODE_29577_length_228_cov_4.413408_g29270_i0 PRJNA340009 29577 228 4.413408 10.06257024 Naegleria 5761 Heterolobosea other_Eukaryota 416 6.259999999999998e-112   NTclustered gi|38606345|gb|AY376153.1| 5762 g29270 i0 99.561 98.2017543859649 228 1 100 0 1 228 651 878 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 22390 416 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22068454 22068454 PRJNA340009_P_NODE_24378_length_248_cov_2.417085_g24071_i0 PRJNA340009 24378 248 2.417085 5.9943708000000004 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 448 2.4499999999999996e-121   NTclustered gi|11466174|ref|NC_002573.1| 5762 g24071 i0 99.194 16.8588709677419 248 2 100 0 1 248 2000 1753 Naegleria gruberi mitochondrion, complete genome blastn 4181 448 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22068984 22068984 PRJNA340009_P_NODE_69178_length_164_cov_0.886957_g68871_i0 PRJNA340009 69178 164 0.886957 1.45460948 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 254 3.5e-63   NTclustered gi|291001120|ref|XM_002683081.1| 5762 g68871 i0 94.512 1 164 9 100 0 1 164 678 841 Naegleria gruberi polysaccharide biosynthesis protein (NAEGRDRAFT_77736), partial mRNA blastn 164 254 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23344163 23344163 PRJNA340009_P_NODE_45219_length_191_cov_1.436620_g44912_i0 PRJNA340009 45219 191 1.43662 2.7439442 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 300 5.31e-77   NTclustered gi|290977247|ref|XM_002671304.1| 5762 g44912 i0 94.845 4.8586387434555 194 7 100 1 1 191 418 225 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55455), partial mRNA blastn 928 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24021988 24021988 PRJNA340009_P_NODE_80499_length_152_cov_15.621359_g80192_i0 PRJNA340009 80499 152 15.621359 23.74446568 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 270 3.15e-68   NTclustered gi|1540304044|dbj|LC128773.1| 5762 g80192 i0 98.684 99.9736842105263 152 2 100 0 1 152 48 199 Naegleria gruberi genes for ITS1, 5.8S rRNA, ITS2, partial and complete sequence, strain: OUKB7 blastn 15196 272 0.992647058823529 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24617987 24617987 PRJNA340009_P_NODE_1340_length_815_cov_2.560052_g1085_i0 PRJNA340009 1340 815 2.560052 20.8644238 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1437 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g1085 i0 98.528 23.8085889570552 815 11 100 1 1 815 911 1724 Naegleria gruberi mitochondrion, complete genome blastn 19404 1437 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;