RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA340009 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13145734 13145734 PRJNA340009_P_NODE_35071_length_212_cov_29.754601_g34764_i0 PRJNA340009 35071 212 29.754601 63.07975412 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 52.8 0.019   NTclustered gi|2108425585|gb|CP070631.1| 2053570 g34764 i0 100 0.132075471698113 28 0 13 0 164 191 3278671 3278644 MAG: Candidatus Latescibacterota bacterium isolate bin977 chromosome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
20196213 20196213 PRJNA340009_P_NODE_63836_length_166_cov_1.717949_g63529_i0 PRJNA340009 63836 166 1.717949 2.85179534 Bacteria 2 Bacteria Bacteria 174 2.84e-39   NTclustered gi|2518550840|emb|OX638317.1| 199737 g63529 i0 85.629 264.698795180723 167 22 100 2 1 166 3960900 3961065 MAG: uncultured Latescibacteria bacterium isolate cbbe8a84-e08a-4d06-a76e-2eb930d8ff24 genome assembly, chromosome: 1 blastn 43940 174 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;