contig_metadata
28 rows where analysis = "blastn", bioproject = "PRJNA340009" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392456 | 392456 | PRJNA340009_P_NODE_63021_length_167_cov_0.864407_g62714_i0 | PRJNA340009 | 63021 | 167 | 0.864407 | 1.44355969 | Thermus thermophilus | 274 | Bacteria | Bacteria | 237 | 3.599999999999999e-58 | NTclustered | gi|2199618452|dbj|AP025604.1| | 274 | g62714 | i0 | 92.216 | 1.98203592814371 | 167 | 13 | 100 | 0 | 1 | 167 | 161543 | 161709 | Thermus thermophilus SNM1-7 plasmid pTthSNM1-7b DNA, complete sequence | blastn | 331 | 237 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 392479 | 392479 | PRJNA340009_P_NODE_64821_length_166_cov_0.871795_g64514_i0 | PRJNA340009 | 64821 | 166 | 0.871795 | 1.4471797 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 279 | 5.86e-71 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g64514 | i0 | 96.988 | 7.42168674698795 | 166 | 5 | 100 | 0 | 1 | 166 | 1566616 | 1566451 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 1232 | 279 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 392501 | 392501 | PRJNA340009_P_NODE_66321_length_165_cov_1.241379_g66014_i0 | PRJNA340009 | 66321 | 165 | 1.241379 | 2.04827535 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 276 | 7.52e-70 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g66014 | i0 | 98.71 | 270 | 155 | 2 | 94 | 0 | 11 | 165 | 2342644 | 2342490 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 44550 | 276 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 2345360 | 2345360 | PRJNA340009_P_NODE_33122_length_218_cov_1.337278_g32815_i0 | PRJNA340009 | 33122 | 218 | 1.337278 | 2.91526604 | Deinococcus | 1298 | Bacteria | Bacteria | 387 | 4.649999999999998e-103 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g32815 | i0 | 98.624 | 325.853211009174 | 218 | 3 | 100 | 0 | 1 | 218 | 1792221 | 1792438 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 71036 | 387 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 2943212 | 2943212 | PRJNA340009_P_NODE_74883_length_162_cov_0.902655_g74576_i0 | PRJNA340009 | 74883 | 162 | 0.902655 | 1.4623011 | Thermus aquaticus | 271 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|939575972|gb|CP010822.1| | 498848 | g74576 | i0 | 100 | 5.47530864197531 | 162 | 0 | 100 | 0 | 1 | 162 | 1843871 | 1844032 | Thermus aquaticus Y51MC23, complete genome | blastn | 887 | 300 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 4897931 | 4897931 | PRJNA340009_P_NODE_57244_length_173_cov_1.354839_g56937_i0 | PRJNA340009 | 57244 | 173 | 1.354839 | 2.34387147 | Deinococcus | 1298 | Bacteria | Bacteria | 292 | 7.87e-75 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g56937 | i0 | 97.11 | 210.21387283237 | 173 | 5 | 100 | 0 | 1 | 173 | 2341079 | 2340907 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 36367 | 292 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 4898045 | 4898045 | PRJNA340009_P_NODE_8604_length_385_cov_2.348214_g8297_i0 | PRJNA340009 | 8604 | 385 | 2.348214 | 9.0406239 | Bacteria | 2 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|155128|gb|J04639.1|TTHTAQP1A | 271 | g8297 | i0 | 100 | 47.7480519480519 | 375 | 0 | 97 | 0 | 1 | 375 | 820 | 446 | Thermus aquaticus DNA polymerase (PolI) gene | blastn | 18383 | 693 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 6172970 | 6172970 | PRJNA340009_P_NODE_52445_length_180_cov_0.740458_g52138_i0 | PRJNA340009 | 52445 | 180 | 0.740458 | 1.3328244 | Deinococcus | 1298 | Bacteria | Bacteria | 259 | 8.38e-65 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g52138 | i0 | 94.118 | 185.022222222222 | 170 | 10 | 94 | 0 | 1 | 170 | 1793575 | 1793406 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 33304 | 259 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 6770100 | 6770100 | PRJNA340009_P_NODE_67166_length_165_cov_0.879310_g66859_i0 | PRJNA340009 | 67166 | 165 | 0.87931 | 1.4508615 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 185 | 1.3e-42 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g66859 | i0 | 97.248 | 2.63636363636364 | 109 | 3 | 66 | 0 | 57 | 165 | 666950 | 667058 | Meiothermus silvanus DSM 9946, complete genome | blastn | 435 | 185 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 9320399 | 9320399 | PRJNA340009_P_NODE_57748_length_172_cov_1.658537_g57441_i0 | PRJNA340009 | 57748 | 172 | 1.658537 | 2.85268364 | Thermus aquaticus | 271 | Bacteria | Bacteria | 318 | 1.2899999999999999e-82 | NTclustered | gi|1352798305|gb|CP020572.1| | 271 | g57441 | i0 | 100 | 3.00581395348837 | 172 | 0 | 100 | 0 | 1 | 172 | 50042 | 49871 | Thermus aquaticus strain YT-1 plasmid p61, complete sequence | blastn | 517 | 318 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 9998267 | 9998267 | PRJNA340009_P_NODE_60348_length_169_cov_0.983333_g60041_i0 | PRJNA340009 | 60348 | 169 | 0.983333 | 1.66183277 | Thermus | 270 | Bacteria | Bacteria | 307 | 2.73e-79 | NTclustered | gi|2049910225|gb|CP076325.1| | 88190 | g60041 | i0 | 99.408 | 3.98816568047337 | 169 | 1 | 100 | 0 | 1 | 169 | 970680 | 970512 | MAG: Thermus antranikianii isolate RBS10-92 chromosome, complete genome | blastn | 674 | 307 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus antranikianii | ||
| 10596265 | 10596265 | PRJNA340009_P_NODE_74989_length_162_cov_0.902655_g74682_i0 | PRJNA340009 | 74989 | 162 | 0.902655 | 1.4623011 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 285 | 1.2199999999999998e-72 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g74682 | i0 | 100 | 0.950617283950617 | 154 | 0 | 95 | 0 | 1 | 154 | 2036911 | 2037064 | Meiothermus silvanus DSM 9946, complete genome | blastn | 154 | 285 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 11870897 | 11870897 | PRJNA340009_P_NODE_4750_length_489_cov_2.240909_g4445_i0 | PRJNA340009 | 4750 | 489 | 2.240909 | 10.95804501 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g4445 | i0 | 94.813 | 289.259713701432 | 482 | 20 | 98 | 5 | 11 | 489 | 2341804 | 2342283 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 141448 | 747 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 12548433 | 12548433 | PRJNA340009_P_NODE_17470_length_286_cov_2.299578_g17163_i0 | PRJNA340009 | 17470 | 286 | 2.299578 | 6.57679308 | Thermus | 270 | Bacteria | Bacteria | 523 | 4.659999999999998e-144 | NTclustered | gi|2894814231|gb|CP178485.1| | 56957 | g17163 | i0 | 99.65 | 8.2972027972028 | 286 | 1 | 100 | 0 | 1 | 286 | 1207384 | 1207099 | Thermus oshimai strain Blanco chromosome, complete genome | blastn | 2373 | 523 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 12548494 | 12548494 | PRJNA340009_P_NODE_29170_length_230_cov_1.071823_g28863_i0 | PRJNA340009 | 29170 | 230 | 1.071823 | 2.4651929 | Deinococcus | 1298 | Bacteria | Bacteria | 339 | 1.41e-88 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g28863 | i0 | 94.907 | 180.013043478261 | 216 | 11 | 94 | 0 | 5 | 220 | 2341542 | 2341757 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 41403 | 339 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 13145704 | 13145704 | PRJNA340009_P_NODE_32711_length_219_cov_1.917647_g32404_i0 | PRJNA340009 | 32711 | 219 | 1.917647 | 4.19964693 | Deinococcus aetherius | 200252 | Bacteria | Bacteria | 359 | 1.0199999999999999e-94 | NTclustered | gi|2281894955|dbj|AP026560.1| | 200252 | g32404 | i0 | 97.608 | 198.283105022831 | 209 | 5 | 95 | 0 | 11 | 219 | 83987 | 83779 | Deinococcus aetherius ST0316 DNA, complete genome | blastn | 43424 | 359 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aetherius | ||
| 13146126 | 13146126 | PRJNA340009_P_NODE_69651_length_164_cov_0.886957_g69344_i0 | PRJNA340009 | 69651 | 164 | 0.886957 | 1.45460948 | Thermus parvatiensis | 456163 | Bacteria | Bacteria | 292 | 7.41e-75 | NTclustered | gi|982539283|gb|CP014141.1| | 456163 | g69344 | i0 | 98.78 | 34.9207317073171 | 164 | 2 | 100 | 0 | 1 | 164 | 433887 | 433724 | Thermus parvatiensis strain RL, complete genome | blastn | 5727 | 292 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus parvatiensis | ||
| 13823502 | 13823502 | PRJNA340009_P_NODE_44951_length_191_cov_3.415493_g44644_i0 | PRJNA340009 | 44951 | 191 | 3.415493 | 6.52359163 | Deinococcus | 1298 | Bacteria | Bacteria | 303 | 4.11e-78 | NTclustered | gi|2155018472|emb|OV024758.1| | 1299 | g44644 | i0 | 95.288 | 164.910994764398 | 191 | 9 | 100 | 0 | 1 | 191 | 144802 | 144992 | Deinococcus radiodurans isolate DRR11 genome assembly, plasmid: 2 | blastn | 31498 | 305 | 0.99344262295082 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 14420964 | 14420964 | PRJNA340009_P_NODE_41292_length_198_cov_6.476510_g40985_i0 | PRJNA340009 | 41292 | 198 | 6.47651 | 12.8234898 | Thermus scotoductus | 37636 | Bacteria | Bacteria | 361 | 2.51e-95 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g40985 | i0 | 99.495 | 7.95959595959596 | 198 | 1 | 100 | 0 | 1 | 198 | 671500 | 671697 | Thermus scotoductus SA-01, complete genome | blastn | 1576 | 361 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 15695190 | 15695190 | PRJNA340009_P_NODE_74913_length_162_cov_0.902655_g74606_i0 | PRJNA340009 | 74913 | 162 | 0.902655 | 1.4623011 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 239 | 9.64e-59 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g74606 | i0 | 93.21 | 12.1049382716049 | 162 | 11 | 100 | 0 | 1 | 162 | 2669858 | 2670019 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 1961 | 239 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 16969888 | 16969888 | PRJNA340009_P_NODE_70054_length_164_cov_0.886957_g69747_i0 | PRJNA340009 | 70054 | 164 | 0.886957 | 1.45460948 | Thermosipho africanus | 2421 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|217035986|gb|CP001185.1| | 484019 | g69747 | i0 | 97.059 | 0.207317073170732 | 34 | 0 | 21 | 1 | 129 | 162 | 679829 | 679797 | Thermosipho africanus TCF52B, complete genome | blastn | 34 | 56.5 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Thermotogales | Fervidobacteriaceae | Thermosipho | Thermosipho africanus | ||
| 17647760 | 17647760 | PRJNA340009_P_NODE_68514_length_164_cov_1.660870_g68207_i0 | PRJNA340009 | 68514 | 164 | 1.66087 | 2.7238268 | Thermus | 270 | Bacteria | Bacteria | 285 | 1.24e-72 | NTclustered | gi|939575858|gb|CP010824.1| | 498848 | g68207 | i0 | 100 | 1.8780487804878 | 154 | 0 | 94 | 0 | 11 | 164 | 1534 | 1381 | Thermus aquaticus Y51MC23 plasmid pTA16, complete sequence | blastn | 308 | 285 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 18244071 | 18244071 | PRJNA340009_P_NODE_69175_length_164_cov_0.886957_g68868_i0 | PRJNA340009 | 69175 | 164 | 0.886957 | 1.45460948 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 279 | 5.77e-71 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g68868 | i0 | 99.351 | 0.939024390243902 | 154 | 1 | 94 | 0 | 11 | 164 | 822161 | 822008 | Meiothermus silvanus DSM 9946, complete genome | blastn | 154 | 279 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 18921586 | 18921586 | PRJNA340009_P_NODE_66675_length_165_cov_0.879310_g66368_i0 | PRJNA340009 | 66675 | 165 | 0.87931 | 1.4508615 | Thermus | 270 | Bacteria | Bacteria | 274 | 2.7e-69 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g66368 | i0 | 96.933 | 5.93939393939394 | 163 | 5 | 99 | 0 | 1 | 163 | 1963502 | 1963664 | Thermus scotoductus SA-01, complete genome | blastn | 980 | 274 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 19518383 | 19518383 | PRJNA340009_P_NODE_74196_length_162_cov_0.902655_g73889_i0 | PRJNA340009 | 74196 | 162 | 0.902655 | 1.4623011 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 222 | 9.709999999999999e-54 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g73889 | i0 | 91.358 | 91.7407407407407 | 162 | 14 | 100 | 0 | 1 | 162 | 522559 | 522720 | Meiothermus silvanus DSM 9946, complete genome | blastn | 14862 | 222 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 19518411 | 19518411 | PRJNA340009_P_NODE_76776_length_161_cov_0.910714_g76469_i0 | PRJNA340009 | 76776 | 161 | 0.910714 | 1.46624954 | Deinococcus sp. D7000 | 2755035 | Bacteria | Bacteria | 248 | 1.59e-61 | NTclustered | gi|1868564649|gb|CP058536.1| | 2755035 | g76469 | i0 | 94.937 | 1.95652173913043 | 158 | 8 | 98 | 0 | 1 | 158 | 95125 | 94968 | Deinococcus sp. D7000 plasmid p_2, complete sequence | blastn | 315 | 248 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. D7000 | ||
| 20793256 | 20793256 | PRJNA340009_P_NODE_13817_length_316_cov_5.640449_g13510_i0 | PRJNA340009 | 13817 | 316 | 5.640449 | 17.82381884 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 584 | 2.359999999999999e-162 | NTclustered | gi|1819261009|gb|CP049357.1| | 1288484 | g13510 | i0 | 100 | 97.2626582278481 | 316 | 0 | 100 | 0 | 1 | 316 | 1969523 | 1969208 | Deinococcus wulumuqiensis R12 chromosome, complete genome | blastn | 30735 | 584 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 22746873 | 22746873 | PRJNA340009_P_NODE_28978_length_230_cov_3.337017_g28671_i0 | PRJNA340009 | 28978 | 230 | 3.337017 | 7.6751391 | Deinococcus | 1298 | Bacteria | Bacteria | 337 | 5.059999999999998e-88 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g28671 | i0 | 93.043 | 7 | 230 | 16 | 100 | 0 | 1 | 230 | 1755665 | 1755436 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 1610 | 337 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;