RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA339266" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA339266 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1666008 1666008 PRJNA339266_P_NODE_8242_length_153_cov_4.000000_g8212_i0 PRJNA339266 8242 153 4 6.12 Malassezia globosa 76773 Fungi Fungi 147 5.589999999999999e-31   NTclustered gi|1805972860|gb|CP046440.1| 76773 g8212 i0 100 10.1503267973856 79 0 87 0 1 79 2781 2859 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 1553 147 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
1666239 1666239 PRJNA339266_S_NODE_4682_length_218_cov_2.447514_g4671_i0 PRJNA339266 4682 218 2.447514 5.33558052 Malassezia restricta 76775 Fungi Fungi 231 2.3099999999999997e-56   NTclustered gi|1546635923|ref|XM_027629604.1| 76775 g4671 i0 98.473 1.04587155963303 131 2 94 0 14 144 1 131 Malassezia restricta parafibromin (MRET_2977), partial mRNA blastn 228 231 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8722428 8722428 PRJNA339266_P_NODE_6527_length_172_cov_1.614815_g6497_i0 PRJNA339266 6527 172 1.614815 2.7774818 Sporidiobolaceae 1799696 Fungi Fungi 318 1.2899999999999999e-82   NTclustered gi|671394780|gb|KJ806312.1| 5288 g6497 i0 100 99.9767441860465 172 0 100 0 1 172 736 907 Rhodosporidium diobovatum isolate H-5 18S ribosomal RNA gene, partial sequence blastn 17196 318 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula diobovata
13823321 13823321 PRJNA339266_S_NODE_4211_length_223_cov_7.876344_g4200_i0 PRJNA339266 4211 223 7.876344 17.56424712 Agaricales 5338 Fungi Fungi 363 8.049999999999997e-96   NTclustered gi|358679416|gb|JQ045879.1| 5350 g4200 i0 95.982 100.273542600897 224 7 100 2 1 223 270 48 Coprinopsis radiata strain SZMC-NL-1269 28S ribosomal RNA (LSU) gene, partial sequence blastn 22361 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Psathyrellaceae Coprinopsis Coprinopsis radiata
16968684 16968684 PRJNA339266_P_NODE_4394_length_189_cov_4.309211_g4364_i0 PRJNA339266 4394 189 4.309211 8.14440879 Trametes versicolor 5325 Fungi Fungi 121 4.38e-23   NTclustered gi|636622788|ref|XM_008044338.1| 717944 g4364 i0 93.75 0.423280423280423 80 5 42 0 2 81 325 404 Trametes versicolor FP-101664 SS1 uncharacterized protein (TRAVEDRAFT_23145), partial mRNA blastn 80 121 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes versicolor
23343500 23343500 PRJNA339266_S_NODE_3259_length_238_cov_4.960199_g3248_i0 PRJNA339266 3259 238 4.960199 11.80527362 Coprinellus micaceus 71717 Fungi Fungi 385 1.86e-102   NTclustered gi|2088246494|ref|NC_057083.1| 71717 g3248 i0 95.798 104.411764705882 238 10 100 0 1 238 18990 18753 Coprinellus micaceus mitochondrion, complete genome blastn 24850 385 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Psathyrellaceae Coprinellus Coprinellus micaceus
24021633 24021633 PRJNA339266_S_NODE_5779_length_206_cov_4.248521_g5768_i0 PRJNA339266 5779 206 4.248521 8.75195326 Basidiomycota 5204 Fungi Fungi 375 9.41e-100   NTclustered gi|1256909|dbj|D38239.1|BENJCM2896 4996 g5768 i0 99.515 100 206 1 100 0 1 206 762 967 Bensingtonia yamatoana (strain JCM 2896) gene for 18S rRNA blastn 20600 375 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes   Chrysozymaceae Bannozyma Bannozyma yamatoana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;