contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA330616" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3620160 | 3620160 | PRJNA330616_P_NODE_5683_length_352_cov_1.937294_g5274_i0 | PRJNA330616 | 5683 | 352 | 1.937294 | 6.81927488 | Ironus | 211205 | Nematoda | Nematoda | 207 | 6.71e-49 | NTclustered | gi|68271495|gb|DQ086676.1| | 554024 | g5274 | i0 | 83.482 | 57.46875 | 224 | 35 | 63 | 2 | 106 | 327 | 175 | 398 | Uncultured nematode isolate NEMATD17 large subunit ribosomal RNA gene, partial sequence | blastn | 20229 | 207 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Nematoda environmental sample | |||||
| 11868242 | 11868242 | PRJNA330616_P_NODE_17610_length_200_cov_1.350993_g17201_i0 | PRJNA330616 | 17610 | 200 | 1.350993 | 2.701986 | Ancylostoma duodenale | 51022 | Nematoda | Nematoda | 161 | 2.77e-35 | NTclustered | gi|66734013|gb|DQ055415.1| | 51022 | g17201 | i0 | 81.538 | 53.43 | 195 | 36 | 98 | 0 | 6 | 200 | 1239 | 1045 | Ancylostoma duodenale beta-tubulin mRNA, complete cds | blastn | 10686 | 161 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Ancylostomatidae | Ancylostoma | Ancylostoma duodenale | |
| 13143346 | 13143346 | PRJNA330616_P_NODE_31531_length_162_cov_0.902655_g31122_i0 | PRJNA330616 | 31531 | 162 | 0.902655 | 1.4623011 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 102 | 1.32e-17 | NTclustered | gi|1972257304|ref|NM_064671.9| | 6239 | g31122 | i0 | 82.609 | 4.24074074074074 | 115 | 20 | 71 | 0 | 9 | 123 | 190 | 76 | Caenorhabditis elegans Ribosomal protein L37 (rpl-37.1), partial mRNA | blastn | 687 | 102 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 18920932 | 18920932 | PRJNA330616_P_NODE_5155_length_372_cov_1.879257_g4746_i0 | PRJNA330616 | 5155 | 372 | 1.879257 | 6.99083604 | Opisthokonta | 33154 | Nematoda | Nematoda | 274 | 6.94e-69 | NTclustered | gi|1376156759|ref|XM_024645793.1| | 34506 | g4746 | i0 | 82.099 | 87.1182795698925 | 324 | 54 | 86 | 4 | 1 | 321 | 355 | 33 | Strongyloides ratti Ras-like protein 3 (SRAE_X000250800), partial mRNA | blastn | 32408 | 274 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 20791377 | 20791377 | PRJNA330616_P_NODE_8697_length_281_cov_1.775862_g8288_i0 | PRJNA330616 | 8697 | 281 | 1.775862 | 4.99017222 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 211 | 4.04e-50 | NTclustered | gi|268559799|ref|XM_002646027.1| | 6238 | g8288 | i0 | 92.053 | 55.864768683274 | 151 | 10 | 53 | 2 | 131 | 280 | 1307 | 1158 | Caenorhabditis briggsae Protein CBG07939 (CBG07939), partial mRNA | blastn | 15698 | 211 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;